Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03563 ATGGCTTCTCTCAATCCATTAGCCACTCTTTTTCTCTCTTACCTTCTTCTAACTTTGCTTCTCTCTGAAGCTAAACACACAACTTCTTCAAAATCCACCAAGATCGGTCAAGGTTACCGTTTGATATCTATTCAAGATGACCCTAATGGTGCTGTCACTGGACTCCTTCAAGTTAAGGAGAAGAATGATATCTATGGTCCTGACATTCCCCTTCTTCGCTTCTACGTCAAACATGAGACTGAGAATCGTCTGAGGGTACAAATAACAGATGCAAAGAACAAAAGGTGGGAGGTTCCTTACAATCTTTTGCCAAGGGAGCAACCACCACCTCTGAAGCAGAACATTAAGAGGTTGAAGAAGAAGAAGCCATTATCAGTTTCAGAGTATTCAAGCTCTGAGCTTGTTTTCAGTTACACTTCTGACCCATTTAGCTTTGCAGTGAAAAGAAAGTCCAATGGTGATACCCTTTTCGACTCCAATTCTAACAATTCAGATTCATTTGGTCCATTGGTTTTCAAAGACCAATACTTAGAAATCTCTACCAAGTTGTCCAAAGATGCTTCTTTGTATGGTTTTGGAGAAAACACACAGCCACATGGGATAAAGTTGCATCCAAATGATCCTTATACTTTGTTTACCACTGATGTATCAGCTATTAATCTCAATACTGATCTGTATGGTTCACACCCTGTATACATGGATCTTAGAAATGAAGGTGGAAAATCTTATGCACATGGTGTTCTGTTGTTGAATAGCAATGGAATGGATGTGTTTTACAAAGGAACCTCTCTGACCTACAAGGTTATTGGAGGGGTTCTTGATTTTTACTTCTTTGCAGGTCCTACGCCGCTTAATGTTGTTGATCAGTACACGTCGTTTATCGGTAGACCAGCTCCAATGCCTTATTGGGCTTTTGGATTCCACCAATGCAGATGGGGTTATCACAACCTATCTGTTGTAGAAGATGTTGTCGAAAATTACAAGAAAGCCAAAATCCCCCTTGATGTTATATGGAACGATGACGATCACATGGATGGACATAAGGATTTCACACTCAATCCAGTTAGCTACCCTCATTCAAAGCTCTTAAACTTTCTAGATAGAATACACAGCATTGGAATGAAATACATTGTGATCAATGATCCTGGAATAGCTGTTAACTCTAGTTATGGTGTATACCAAAGAGGCATGGCTAATGATGTTTTTATCAAGTATGAGGGTGAACCTTTCTTGGCTCAAGTTTGGCCAGGAGCAGTGTACTTTCCTGATTTTCTCAATCCAAAAACAGTTTCTTGGTGGGGTGATGAGATTCGCCGCTTCCATGAACTAGTCCCGATTGATGGCTTATGGATTGACATGAATGAAGCCTCAAATTTCTGCTCTGGAAAGTGTACAATTCCTAAAGGAAAAGTGTGCCCAAGTGGAACAGGACCCGGTTGGATATGTTGCTTAGATTGCAAAAACATCACTAAAACGCGATGGGATGATCCTCCCTACAAAATAAATGCTTCAGGATTACAAGCTCCTATAGGTTTCAAAACTATAGCCACGAGTGCAGTTCACTATAACGGTGTTTTAGAGTACGATGCTCATAGTATTTATGGTTTTGCTCAAACCATTGCAACTCACAAGGCCCTTCAGGGGCTTCAAGGAAAAAGGCCTTTTATTTTATCCCGCTCGACTTATGTTGGTTCAGGCAAATATGCAGCACATTGGACAGGTGACAACAAAGGAACATGGGAGGATTTAAGATACTCAATATCTACAATGCTGAATTTCGGAATATTTGGAGTGCCAATGGTTGGCTCTGATATATGCGGTTTCTATCCAGCCCCGACTGAAGAGCTTTGCAATAGGTGGATCGAAGTTGGTGCTTTCTACCCTTTCTCAAGAGACCATGCAAACTACTACTCTCCAAGACAAGAGCTTTACCAATGGGAATCCGTAGCCGAATCGGCTAGAAATTCTCTAGGGATGAGATATAAGCTCCTACCCTATCTGTACACGTTAAACTACGAGGCACATATTAGTGGAGCCCCGATTGCTCGGCCTCTTTTCTTCTCGTTTCCAAATTATGTTCAATGTTACGGCCTAAGCACTCAGTTCTTACTTGGAAGTGGCCTAATGATTTCTCCTGTTCTCGAGCAAGGGAAAACGGAAGTTAAAGCACTCTTTCCGCCCGGAACATGGTACAGTTTATTTGATTTGACACAAGTCATTGTTTCAAAAGACGGAAACTATGTGACCCTTAATGCACCCTTGCATGTGGTCAATGTGCATTTATATCAGAACATCATTCTTCCAATGCAACAAGGTGGTCTGGTATCTAAGGATGCTAGAATGACACCTTTTAGCCTCATTGTGACATTTCCAGCTGGTGCAAATGAAGGTGTGGCTAAAGGGAACTTATTCCTTGACGACGACGAGCTTCCAGAAATGAAGCTTGGAAATGGCCATTCAACATATATTGACTTTCATGCAAGTGTGAAAGAAGGAACTGTGAAAGTTTGGTCAGAAGTCCAAGAGGGTGGGTTTGCTTTGGATAAAGGTTGGGTTATTGACACAATAAATGTATTGGGATTGAATGGAAATGGAGCAACAGCTACAATGGAAATAGATGGTACACAATCAAATGTGAAAATTGATATAACTCAACAAAGTTACTTATATGGACAAGGAGATGGAGAAAAGAAGACAGTGATGGCAGGAATGAAGGGATTGAATATCCCAGTAGGTAAAAATTTCTCTGTGACTTGGAAGATGGGATCATGA 2772 0.4095 MASLNPLATLFLSYLLLTLLLSEAKHTTSSKSTKIGQGYRLISIQDDPNGAVTGLLQVKEKNDIYGPDIPLLRFYVKHETENRLRVQITDAKNKRWEVPYNLLPREQPPPLKQNIKRLKKKKPLSVSEYSSSELVFSYTSDPFSFAVKRKSNGDTLFDSNSNNSDSFGPLVFKDQYLEISTKLSKDASLYGFGENTQPHGIKLHPNDPYTLFTTDVSAINLNTDLYGSHPVYMDLRNEGGKSYAHGVLLLNSNGMDVFYKGTSLTYKVIGGVLDFYFFAGPTPLNVVDQYTSFIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPVSYPHSKLLNFLDRIHSIGMKYIVINDPGIAVNSSYGVYQRGMANDVFIKYEGEPFLAQVWPGAVYFPDFLNPKTVSWWGDEIRRFHELVPIDGLWIDMNEASNFCSGKCTIPKGKVCPSGTGPGWICCLDCKNITKTRWDDPPYKINASGLQAPIGFKTIATSAVHYNGVLEYDAHSIYGFAQTIATHKALQGLQGKRPFILSRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNSLGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPNYVQCYGLSTQFLLGSGLMISPVLEQGKTEVKALFPPGTWYSLFDLTQVIVSKDGNYVTLNAPLHVVNVHLYQNIILPMQQGGLVSKDARMTPFSLIVTFPAGANEGVAKGNLFLDDDELPEMKLGNGHSTYIDFHASVKEGTVKVWSEVQEGGFALDKGWVIDTINVLGLNGNGATATMEIDGTQSNVKIDITQQSYLYGQGDGEKKTVMAGMKGLNIPVGKNFSVTWKMGS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03563 923 Gene3D - 765 923 IPR013780 -
Vivi1g03563 923 PANTHER ALPHA-GLUCOSIDASE 36 885 - -
Vivi1g03563 923 FunFam Alpha-glucosidase 1 663 763 - -
Vivi1g03563 923 SUPERFAMILY Glycosyl hydrolase domain 680 760 - -
Vivi1g03563 923 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 53 184 IPR031727 -
Vivi1g03563 923 CDD GH31_MGAM_SI_GAA 295 675 - -
Vivi1g03563 923 SUPERFAMILY (Trans)glycosidases 286 678 IPR017853 -
Vivi1g03563 923 SUPERFAMILY Galactose mutarotase-like 35 283 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vivi1g03563 923 CDD GH31_N 177 295 - -
Vivi1g03563 923 Pfam Galactose mutarotase-like 187 255 IPR025887 -
Vivi1g03563 923 ProSitePatterns Glycosyl hydrolases family 31 active site. 448 455 IPR030458 -
Vivi1g03563 923 FunFam Maltase-glucoamylase, intestinal 297 662 - -
Vivi1g03563 923 Gene3D - 663 762 IPR013780 -
Vivi1g03563 923 Pfam Glycosyl hydrolases family 31 276 767 IPR000322 GO:0004553|GO:0005975
Vivi1g03563 923 Gene3D Glycosidases 297 662 - -
Vivi1g03563 923 Gene3D glycosyl hydrolase (family 31) 32 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03563 Vivi-Chr1 76221718 76225748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03563 35 922 Glycoside Hydrolase AT1G68560 75.309 0.0 1447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03563 K15925 - gmx:100816950 1630.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03563 1 76221718 76225748 Vivi1g03563 1 76221718 76225748 ECH