Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03556 ATGGTCAGTTTTGAATCCGTTATGGAACCTTCGGATTCAGCGATTGCGTCGCCTCTTTCTGCCATAGCCGACGCTTTTGAAGAGCTCGTCGAAAAGGTTAAGGATTTTAAGAACGGTTCCTCCGATCATATTCGATTGGATACTTTCTGCGAAATCGCTTCTCTTGTTACCGTTCTTTTTCGTTGTCTTGGTCTTGCTTTCAAATTCGCTGAAATGGAATACGTTTCCAAGCTACATGGACTAGTGGAAGCATCAAAGAAGTATGAGATGCTACAAGATATAATTGACCATGATGTGGCTAATGACACGGTGAAAACTTCAGGAAGCTATTCGCGTAATCTACGCAGAGTTCGGCAGGGTCTTGATCTCGTTAGAGCGATATTCGAACAGCTTTTGTCAACAAGTGATAGTTCTCTGAAAGGAGTGGCTTCAACAGCATATGGAGAGGTTTGTGCGCCGTATCACTCTTGGACAGTCAGAACGGCTGTATATGCTGGGATGTATACACTTCCAACGAGAGACCAATTGTTTGTGAAGCTCAATGAAACAGAGCAAACAGCGGAAAAGAAGATGAGAAGGTACATTAGTGCCTCACTTCCAGTTATAGAATACATTGATAAACTATACCTTTCTCGAAGTATTGTATTGGACTGGTGA 657 0.4262 MVSFESVMEPSDSAIASPLSAIADAFEELVEKVKDFKNGSSDHIRLDTFCEIASLVTVLFRCLGLAFKFAEMEYVSKLHGLVEASKKYEMLQDIIDHDVANDTVKTSGSYSRNLRRVRQGLDLVRAIFEQLLSTSDSSLKGVASTAYGEVCAPYHSWTVRTAVYAGMYTLPTRDQLFVKLNETEQTAEKKMRRYISASLPVIEYIDKLYLSRSIVLDW 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03556 218 Pfam Glycolipid transfer protein (GLTP) 44 182 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vivi1g03556 218 Gene3D Glycolipid transfer protein 11 218 IPR036497 -
Vivi1g03556 218 FunFam Accelerated cell death 11 11 218 - -
Vivi1g03556 218 SUPERFAMILY Glycolipid transfer protein, GLTP 41 214 IPR036497 -
Vivi1g03556 218 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 17 208 IPR014830 GO:0005737|GO:0120009|GO:0120013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03556 Vivi-Chr1 76110443 76112685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03556 11 218 Acyl Lipid Metabolism Gene Families AT4G39670 62.381 9.46e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03556 - - aprc:113872428 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03556 1 76110443 76112685 Vivi1g03556 1 76110443 76112685 ECH