Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03446 ATGGAAAGTATAATTGAAGAAAATATCGTGATTGTAGGAGCTGGAATTGCTGGCCTCACAACCTCCTTGGGACTACACAGATTGGGAATAAGAAGTTTGGTATTAGAAAGTTCAGGTAGTTTGAGAGCAAGTGGATTTGCACTAACAACATGGGAAAATGCTTGGAAAGCTCTGGATGCTGTCGGTGTTGGAGATATCCTCCGCCGCCAACATATACAGCTTCACGGTGGATCCCATGAGGTTTGTTGTGTTAGAAGGCAACTAATGTTAGAAGCCATTGCCAATGAGCTTCCAAGTGGAACCATTAGGTACATGTCAAAGGTGGTTGCTATTCAGGAATCTGGCGTCTCTAAGATACTACACATCGCTGATGGAACAACAGTTAAAACCAAGATATTAATAGGCAGTGATGGAATAAACTCTATGGTAGCAAAGTGGCTAGGCTTCAAGGAGGCTTCTTCCACAGGGAGATATGCAACTAGGGGTTATGTAGAGTTGAAAAACTCTCACAAGTTGGAACCATTATTCATGCAATACTTTGGAAAAGGTTTTAGAGCTGGAGTTATTCCATGTAATGACAAGGGTGTTTATTGGTTTTTCACATGGACTCCTACCATCAAAGATCACCAAAAAGAGCTAGCACAAGATCCAGCTAAACTGAAGCAATATGTGTTAAGCAAGTTAGGAAAGATGCCAAATTATGTTAGATCTTTCATTGAAAACACTGAGTTAGATGCATTTCATTTAGCTCCATTGAGACATAGACATCCTTGGGAGCTTATAATAAAAAGTATTAGCAAAGGAAATGTTTGTGTTGTTGGAGATGCTTTACACCCTATGGCACCTGATCTTGCTCAAGGAGGGTGTAGTGCTCTAGAGGATGGGGTGGTTTTAGCAAGGTGCTTAGCTGAGGCTTTTTCCAAAAATCAAATGGAAGGAGAAGAAGAATATAAAATAATTGAGACATGTTTGAAGAAATATGCAAAGGAGAGAAGATGGAGATGCATTGATCTCATTACTAGATCCTATATTGTGGGTTCCATTCAACAAAGTGGTTCAAAGTTAGTTAATTTCTTTAGGGATAAAGTTTTTGCTACATTTTTAGCTCATCAGCTGTTGAAGAAGTCAAATTTTGATTGTCAACAATTAAAATAG 1155 0.3896 MESIIEENIVIVGAGIAGLTTSLGLHRLGIRSLVLESSGSLRASGFALTTWENAWKALDAVGVGDILRRQHIQLHGGSHEVCCVRRQLMLEAIANELPSGTIRYMSKVVAIQESGVSKILHIADGTTVKTKILIGSDGINSMVAKWLGFKEASSTGRYATRGYVELKNSHKLEPLFMQYFGKGFRAGVIPCNDKGVYWFFTWTPTIKDHQKELAQDPAKLKQYVLSKLGKMPNYVRSFIENTELDAFHLAPLRHRHPWELIIKSISKGNVCVVGDALHPMAPDLAQGGCSALEDGVVLARCLAEAFSKNQMEGEEEYKIIETCLKKYAKERRWRCIDLITRSYIVGSIQQSGSKLVNFFRDKVFATFLAHQLLKKSNFDCQQLK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03446 384 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 7 383 IPR044560 -
Vivi1g03446 384 SUPERFAMILY FAD/NAD(P)-binding domain 8 373 IPR036188 -
Vivi1g03446 384 Pfam FAD binding domain 124 307 IPR002938 GO:0071949
Vivi1g03446 384 Pfam FAD binding domain 8 84 IPR002938 GO:0071949
Vivi1g03446 384 Gene3D - 8 364 IPR036188 -
Vivi1g03446 384 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Vivi1g03446 384 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 267 282 - -
Vivi1g03446 384 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03446 Vivi-Chr1 74013665 74023700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03446 1 383 Miscellaneous Gene Families AT5G05320 49.020 8.45e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03446 - - tpra:123902776 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03446 1 74013665 74023700 Vivi1g03446 1 74013665 74023700 ECH