Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03443 ATGGAAACAACACTCATGTGCTTTCGCTATTATTTGTTCATAGCAATTTGTTGCTGCTTTGGCAATTATGTACATGCTATTGAATCACCCAAGTATACAGTAATACAATCAGAATCAGATTTTCAGATCAGACTCTACAATGAATCCTCATGGATCTCTGCTCCATCTTCCGGAACTAATTCATTCGAGCTTTCCACAAAAGCCGGATTTCACAGGTTGTACCAATATATTCACGGAGCGAATTTAAATTCTTCCAAACTCGCAATCACTGCTCCAATCTTAACAAGAATTCCTTCATCAGTATCATCTGAGGTTGGCTATAGTGTAAGAATGTACGTATCACCTCACTTTCAAGGGAAGCCTCCACAGCCAAATCCCGAACTGAAGTTGCAACTTGAGAAATGGAAATCTCAATGCATAGCAGTTAGAAAATTCAGTGGATATGCAAAGGATGATAACATAAACAAAGAAATTGAAGCTCTTGTTAGTAGCTTAAACAAGAAGTTAGATAAAACATCAGAAATAGTACATGATGCAAGCTCGTATACCGTTGCTCAATACAATGCATCTTTTCGTGATACTGAGCGGGTAAATGAGGTGTGGATAAATGTGTCAGGATTCAGAACTGATTGCTGA 636 0.3805 METTLMCFRYYLFIAICCCFGNYVHAIESPKYTVIQSESDFQIRLYNESSWISAPSSGTNSFELSTKAGFHRLYQYIHGANLNSSKLAITAPILTRIPSSVSSEVGYSVRMYVSPHFQGKPPQPNPELKLQLEKWKSQCIAVRKFSGYAKDDNINKEIEALVSSLNKKLDKTSEIVHDASSYTVAQYNASFRDTERVNEVWINVSGFRTDC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03443 211 Pfam SOUL heme-binding protein 27 202 IPR006917 -
Vivi1g03443 211 FunFam Heme-binding protein 2 27 210 - -
Vivi1g03443 211 PANTHER HEME-BINDING PROTEIN-RELATED 26 204 IPR006917 -
Vivi1g03443 211 Gene3D Regulatory factor, effector binding domain 26 208 IPR011256 -
Vivi1g03443 211 SUPERFAMILY Probable bacterial effector-binding domain 18 204 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03443 Vivi-Chr1 73984727 73985895 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03443 - - psat:127074926 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03443 1 73984727 73985895 Vivi1g03443 1 73984727 73985895 ECH