Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03272 ATGGGAATTTTCGCAACCAAGTTCTTCACAAGAGCCCGCAACTTCATAGGCATAGGACTCGCCGCTACCGCCCCCATCGCCGCCACATCTTCCTCCTCCTCCTCCGCCACTTCCACCTCTTCTTCCGACGACACCGACTCTTCCTACTATTCTTCCTCCGACCAATCAAACGGCCGTAAGTTACTGAAAACGAAGCTATGCATAATCGGAAGTGGCCCTGCGGCTCACACAGCCGCCATTTACGCCGCTCGAGCCGAGCTCAAGCCGATCCTGTTCGAAGGATGGATGGCGAACGATACTGCTCCGGGAGGTCAGCTCACTACCACAACTGACGTCGAGAATTTCCCGGGTTTTCCGGATGGGATCCTTGGTGCCGAACTCATGGACAGCTGCCGTAAACAATCACATCGGTTAGGTGCCAAAATCATCACCGAAACAGTTACAAAGGTAGATTTCTCTAAAAGGCCGTTACAAGTTGTAACTGATTCCACTACGGTGGAGGCCGAATCCGTCGTAATTGCCACTGGAGCCATCGCGAAAAAGTTGGTTTTCGAAGGCTCTGGTGACGGTCCTGACGGATTCTGGAATCGCGGAATATCGGCCTGCGCGGTCTGTGACGGCGCTGCTCCGATATTCCGAAACAAACCCTTAGTGGTTGTCGGCGGCGGGGATACCGCTATGGAGGAAGCTACATTCCTCAGCAAATTCGGTTCGAAAGTTTACATAATTCATAGGAGGGATGAGTTTAGGGCTAGTAAAATGATGCAAAGTAGGGTGATGAAGAATCCGAAGGTTGAGGTGTTGTGGAATTCAGTGGTTGTTGGAGCTTATGGAGATGAAAAGGGGAGGGTTCTTGGAGGAGTCAAGGTGAAGAATTTGGTGAATGGTGATGTGTTTGATTTGAAGGTTTCGGGTTTGTTCTTTGCGATTGGGCATGAACCGGCTACGAAGTTTTTAGATGGTCAAGTTGAATTGGATTGTGATGGTTACATTGTGACAAAGCCGGGTACTACGGTGACAAGTGTTGATGGAGTTTTTGCTGCCGGTGATGTGCAGGATAAGAAGTATAGACAAGCTATTACTGCTGCTGGAACTGGGTGCATGGCAGCATTGGATGCAGAACATTACCTGCAACGGGTTGGTTTGAAGCAAGGTAAGAGCGGTTGA 1167 0.5004 MGIFATKFFTRARNFIGIGLAATAPIAATSSSSSSATSTSSSDDTDSSYYSSSDQSNGRKLLKTKLCIIGSGPAAHTAAIYAARAELKPILFEGWMANDTAPGGQLTTTTDVENFPGFPDGILGAELMDSCRKQSHRLGAKIITETVTKVDFSKRPLQVVTDSTTVEAESVVIATGAIAKKLVFEGSGDGPDGFWNRGISACAVCDGAAPIFRNKPLVVVGGGDTAMEEATFLSKFGSKVYIIHRRDEFRASKMMQSRVMKNPKVEVLWNSVVVGAYGDEKGRVLGGVKVKNLVNGDVFDLKVSGLFFAIGHEPATKFLDGQVELDCDGYIVTKPGTTVTSVDGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQRVGLKQGKSG 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03272 388 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 64 379 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 65 87 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 124 134 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 195 207 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 212 236 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 340 358 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 264 280 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 305 326 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 177 - -
Vivi1g03272 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 103 118 - -
Vivi1g03272 388 MobiDBLite consensus disorder prediction 30 56 - -
Vivi1g03272 388 Gene3D - 68 376 IPR036188 -
Vivi1g03272 388 Gene3D - 184 315 IPR036188 -
Vivi1g03272 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 66 85 - -
Vivi1g03272 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 168 186 - -
Vivi1g03272 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 303 319 - -
Vivi1g03272 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 330 352 - -
Vivi1g03272 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
Vivi1g03272 388 Pfam Pyridine nucleotide-disulphide oxidoreductase 65 365 IPR023753 GO:0016491
Vivi1g03272 388 NCBIfam thioredoxin-disulfide reductase 65 377 IPR005982 GO:0004791|GO:0005737|GO:0019430
Vivi1g03272 388 SUPERFAMILY FAD/NAD(P)-binding domain 63 377 IPR036188 -
Vivi1g03272 388 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 202 224 IPR008255 GO:0016491
Vivi1g03272 388 FunFam Thioredoxin reductase 189 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03272 Vivi-Chr1 71109731 71113282 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03272 K00384 - gmx:100794363 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g02719 2 121751465 121754645 Vivi1g03272 1 71109731 71113282 PCT