Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03243 ATGTTTGTCAAGAAACTCGTTGAAAAAGCTTCAATTAAGAAGCCTGGTGGAAATTCACTAGAAGGGTTAAAAGCTAGTGATGTAGATCCACGAGTGGTGTTTCATCAAGGGATACCATCAGGTGGTGACAAATTTGCCTATGACACCATTCAGAAGATACTGGCTCTTTCTACAAAGGATGGCAGGATTAAACTATATGGAAAAGATAATGCTCAAGCCCTGCTTGATTCTAGTGAGCCTCTACCTAGCAAATTTTTACAGTTCATCCAGAACAAAGGCATCCTTTTAAATGTCACTTCCAATAATCATATTGAGGTTTGGGACATAGAGAAGAAACTGCTGTCTGACGTGTATGTTGCTAAAGAAGAAATCACTAGTTTTGCAATCATTCAACATAGCCTCTATATGTATATAGGACATTTTAATGGTAATATATCAGTTTTGAAGCTTGACCAAGATCCATGGCATATAGCTCAGATGAAATACACCATACCCTTTTCTGCTTCCTATGGGAATTCTGAAGTGTCTGATGATACTACTGTGATGCATGTACTACCTCAACCAGCAGCTGAAACTAAGAGGGTTCTCATAATCTTTAAAAATGGCCAAATAATATTATGGGACATTCAGGAAAGCAGAACTATTTTCAGAACTGGTGGAAATATGTTGCAGACACTACATAGTAATGAAACAAAGAAAGTGACTTCGGCATGTTGGGCATGTCCCTTTGGAAGTAAAGTAGTTGTTGGATACAACAATGGAGAGCTCTTCATTTGGAGCATACCTTCTCGAAATACAGGAAATGGTCCTTCTGCATCTGATCATAATAGTCAAAGTCCTTTGCTCAAACTTAACTTAGGATACAAGTCAGAGAAAATTTCTATAGCATCAATTAAATGGACTTATGCAGGAGGAAAGGCTAGTCGACTATATGTCATGGGAGCTTCTGATTATGCAAGTTCAAACTTGTTACAGGTAGTGTTGTTGAATGAGCATACGGAATCTCGCACGACTAAGTTAGGACTTCTTTTGACTGAAAGTTGTGTTGACATGGAGATCATATCAACTTCAACTGAGCAAGACAAGCATAAACAAGATTCTTTCCTTGTGCTGGGAAAGTCAGGTCATGTATATCTATATGATGATGCTTTTATAGAAAGGTATCTGTTACAATCTAAGTCCACGCCTTCACTTCCTAAGGGCGTGATTGCAACATTACCTCTGGCAAGTTCAAGCATCACAACGACAAAGTTCATCTCGAACAACTCCAATGTATTTTATTCTGATGATGAGTACTACAGACAGCTGGTGAAAAATCATCCCCTTTTGGTTCCTGTTGAAACAAATCAAAAAGATGGGATTAGCCCAAATTCTGCTAAGTTTTCTGGATTTTCGAAAGTTCAAAACTTGTATATAACTGGACACAGTAATGGAGCTGTAAACTTCTGGGATGCTTCATGCCCCCTTTTCACCCCAATTTTGCAATTAAAACAACAGAGTGAAAATGACTTTTCATTAAGTGGTATACCCTTGACAACACTGTACTTTGATATCAACTCCCCTCTTCTTGTTTCTGGGGACCAAAGTGGAACGGTTCGCATCTTTAGATTCAAACCTGAACCATATGCCACCAACATCTTTAGTGGTACAAAGAAAGGGACTGATCATGTCATCCAAAGTATGAAAACTGTAAAGATTAATGGTGCCATAACTTCTGTGAGCTTGGATCATAGCTCCGCGTGTCTTGCTGTTGGCTCTGATCAAGGACATGTTTCGGTTTTTAAGATGGATGGCCTAACTCTGTTATATCAGAAACATATAGCTAGTGAAATTTCTGCTGGTATCATCTCCCTGCAATTCCTAGCATGCAGTTTGCATGGTTTTGATAAAAACATTTTAGCAGTTGGAACAAAAGATTCTTCTGTTCTGGCTCTTGATAATGAAACTGGTAACATGACAAGCACAGAAACTGTTCATCCTAAGAAGCCCTCTAAAGCATTATTTATGCAGGTGTTTGATGGACAAGGTGAAGTATTAACAGGATCAGTTACAAAGGATGGATTAGACTTGAGTGAAGGGAATCATATTGAGAATACACCAACAAAGCAATTGTGCTTTCTGCTTTGTTCAGAAAAGGCTTTATATGTGTATTCATTAATGCATGCTGTTCAGGGAGTTAAAAAGGTGCTTCACAAAAAGAAGTTTCACTCGTCTTCCTGTTGTTGGGCATCAACATTTTACTGTCCCTCCGGTGTTGGCCTTGTACTCCTTTTCACCAATGGAAGAGTGGAATTAAGGTCTTTGCCGGAGTTATCCCTGATTGTGGAGACTTCAATTAGAGGTTTCAATTATTCACCTCCAAAATCAAAGTCGTTTTCTGATTGGCAAATATGTTGTTCATCCAAAGGAGATCTTGTTTTGGTGAATGGAGACCAAGAAATATTTTCCGTCTCATTGTTGGTCCAAAGAAATATTTTCAGAATTTTGGATTCTGTTAGCTGCATCTACAAGAAAGAAATGATGCTGTCACAAGAAGAGCTTGTCACTGGCCCAGTCATTCATAAGGAAAAGAAAAGGGGTATCTTCAGCTCTTTCTCTAGCAATAAAGAAAAGCCTGTACCCCCCATGGAAACAGAAAATTCTAGAGAAAGTATCCAGGAACTCTCGGTGATCTTTTCAAAAGAAAACTTTCCTTCTGTTGTTGATAACAATGATAACCTGGCAATTGACGAAGACGAGGTCGAGCTAAATATAGATGATATTGACCTAGATGATCATGTAGAAAAACGCAAAGATCGTGGCATAATGGGACTTGGAGGTCTTAATAAGAAGAAACTGACTGGAAAATTTCAGGCTCTAAAAGGAAGGTTGAAAGAGATGAAGGGAAACATCCAAAAAACATCAGGTAAGGAAGAGCAACAAGAAGAGCGACAAGAAGAGCAACAACCTGGTACAGTCGATCAAATTAAAAAGAGATACGGATTTTCTTCTTCCTCCAATGAAACAAGCGTTGCTAAATTGACAGAAAGCAAGCTGCAGGAGAACTTGAAAAAATTACAGGGTATCAATCTTCGAACAACAGAAATGCAAGATACAGCAAAATCATTTTCATCAATGGCAAACCAAGTACTGCAAAGTGTTGAACAGCAACAAGACAAAAGAAATTGA 3168 0.3848 MFVKKLVEKASIKKPGGNSLEGLKASDVDPRVVFHQGIPSGGDKFAYDTIQKILALSTKDGRIKLYGKDNAQALLDSSEPLPSKFLQFIQNKGILLNVTSNNHIEVWDIEKKLLSDVYVAKEEITSFAIIQHSLYMYIGHFNGNISVLKLDQDPWHIAQMKYTIPFSASYGNSEVSDDTTVMHVLPQPAAETKRVLIIFKNGQIILWDIQESRTIFRTGGNMLQTLHSNETKKVTSACWACPFGSKVVVGYNNGELFIWSIPSRNTGNGPSASDHNSQSPLLKLNLGYKSEKISIASIKWTYAGGKASRLYVMGASDYASSNLLQVVLLNEHTESRTTKLGLLLTESCVDMEIISTSTEQDKHKQDSFLVLGKSGHVYLYDDAFIERYLLQSKSTPSLPKGVIATLPLASSSITTTKFISNNSNVFYSDDEYYRQLVKNHPLLVPVETNQKDGISPNSAKFSGFSKVQNLYITGHSNGAVNFWDASCPLFTPILQLKQQSENDFSLSGIPLTTLYFDINSPLLVSGDQSGTVRIFRFKPEPYATNIFSGTKKGTDHVIQSMKTVKINGAITSVSLDHSSACLAVGSDQGHVSVFKMDGLTLLYQKHIASEISAGIISLQFLACSLHGFDKNILAVGTKDSSVLALDNETGNMTSTETVHPKKPSKALFMQVFDGQGEVLTGSVTKDGLDLSEGNHIENTPTKQLCFLLCSEKALYVYSLMHAVQGVKKVLHKKKFHSSSCCWASTFYCPSGVGLVLLFTNGRVELRSLPELSLIVETSIRGFNYSPPKSKSFSDWQICCSSKGDLVLVNGDQEIFSVSLLVQRNIFRILDSVSCIYKKEMMLSQEELVTGPVIHKEKKRGIFSSFSSNKEKPVPPMETENSRESIQELSVIFSKENFPSVVDNNDNLAIDEDEVELNIDDIDLDDHVEKRKDRGIMGLGGLNKKKLTGKFQALKGRLKEMKGNIQKTSGKEEQQEERQEEQQPGTVDQIKKRYGFSSSSNETSVAKLTESKLQENLKKLQGINLRTTEMQDTAKSFSSMANQVLQSVEQQQDKRN 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03243 1055 Gene3D - 435 686 IPR015943 GO:0005515
Vivi1g03243 1055 FunFam Syntaxin-binding protein 5 isoform A 23 181 - -
Vivi1g03243 1055 MobiDBLite consensus disorder prediction 1033 1055 - -
Vivi1g03243 1055 Gene3D - 43 383 IPR015943 GO:0005515
Vivi1g03243 1055 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 9 1046 - -
Vivi1g03243 1055 MobiDBLite consensus disorder prediction 991 1006 - -
Vivi1g03243 1055 SMART WD40_4 497 536 IPR001680 GO:0005515
Vivi1g03243 1055 SMART WD40_4 399 484 IPR001680 GO:0005515
Vivi1g03243 1055 SMART WD40_4 554 595 IPR001680 GO:0005515
Vivi1g03243 1055 SMART WD40_4 219 260 IPR001680 GO:0005515
Vivi1g03243 1055 SMART WD40_4 110 149 IPR001680 GO:0005515
Vivi1g03243 1055 MobiDBLite consensus disorder prediction 957 986 - -
Vivi1g03243 1055 SUPERFAMILY WD40 repeat-like 86 643 IPR036322 GO:0005515
Vivi1g03243 1055 Coils Coil 943 977 - -
Vivi1g03243 1055 MobiDBLite consensus disorder prediction 957 1006 - -
Vivi1g03243 1055 MobiDBLite consensus disorder prediction 1033 1049 - -
Vivi1g03243 1055 SUPERFAMILY WD40 repeat-like 567 812 IPR036322 GO:0005515
Vivi1g03243 1055 CDD R-SNARE_STXBP5_6 988 1044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03243 Vivi-Chr1 70451236 70460099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03243 - - gmx:100793138 1633.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03243 1 70451236 70460099 Vivi1g03243 1 70451236 70460099 ECH
Vivi2g02769 2 123130495 123139919 Vivi1g03243 1 70451236 70460099 PCT