Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03211 ATGGCATTCATTTTGGCTTTATCAAATGGTTTTGGAAATGCACAGTTCCATCACAAATATAAAGTGCAAATAGATATATCCAAACATGCAGCATGTAGACAAGAAAGAGTGAAGACAAACACAATTACTTGCATCAACTCAGATCTAAAGGCAGAAACATGTTTGCATAGACAGAGCCAAAATGGAAGACCACTGCCCCAAGAGATTAAGGTCAATGTTCCAGGATCATGGGAATCAATGGAGGGTCTTCTTCATTGCTCTGCAAATTCTGTTCCTTTATCTCCTATCAACTTCTTGGAGAGAGCAGCAAAGGTTTGCAGAGACAGAACATCTCTTGTCTATGGTTCCTTGACCTATAACTGGGGACAAACTCATCAACGTTGTCTCAAACTCGCTTCTTCTCTTACCCAATTAGGAATTTCTCGTGGAGATGTGGTTGCGACACTTGCACCTAATGTCCCTGCAATGTATGAGCTACATTTCGCAGTACCAATGTCTGGATCCATTCTTTGTACTCTTAACTCGCGCCTTGATGCAAACATGGTTTCGATTCTATTGGAGCATTCACAAGCAAAGATTCTTTTTGTGGACTGTCAACTAGTCGATATTGCTCGAGGTGCATTGGACCATTTATCCAAAAGATCAAAAAAGAAACCAATTTTAGTCATGATCATGGATTCTAATTATACATCTACTATTGACAGTAGCTCGGTTGGTTACGAATACGAAAAACTTGTAGCTTCTGGACGTGATGATTTCGATATCGTGAGACCGAAGAGTGAATTAGATCCTATAAGTATAAATTACACCTCTGGCACAACTTCTAGGCCTAAAGGAGTTGTATTAAGCCACAGAGGTGCTTATCTAAACTCTCTCGCAACGGTTTTGCTCTTACAAATGAAGCTGTTTCCTGTTTATCTTTGGAATGTTCCATTATTTCATGGCAATGGTTGGTGTCTAGCATGGGGAGTGGCAGCGCAATTCGGAACCAACGTTTGTCTAAGAAAAGTCTCTCCGAAAAACATATTTGACAATATAGTTCAACATAGAGTTACATACATGGGAGGAGCTCCTACTGTGATGAACATGATTGCGAATTATACATTGACGACGAACAGAAAACTGGTTAATCATAAGGTGGAAGTGTTAACAGGAGGTTCCCCTCCACCGCCGCAGATTCTTTCGATGATGGAAGAAAATGGTTTCAATATTACTCACATGTATGGCCTCACAGAAACATTAGGTGCAGGGAGTTTTTGCGCGTGGAGACCCGAGTGGGACATGTTGCCTTCGGAAGAAAGATCGAAGATCAAAGCTAGGCAAGGTGTGCCTCATGTAGGAATGGAGGAAATTGATGTCAAAGATCCTGAAACTATGGAAAGTGTTCCGGCCGATGGAAAAACTGTCGGGGAAGTAATGTTTCGAGGGAATACAATGATGAGTGGTTACTTTAGAGATTTGAAAGCAACAAAAGAAGCATTCAAAGATGGTTGGTTCCATAGTGGGGATTTAGCTGTTAAACATTCCGATGGATACATCGAAATCAAGGACAGGTTGAAGGACATAATAATATCGGGTGGAGAAAACATCAGCTCGATCGAGGTGGAAACTGTTTTGTATAGCCATCCGGCTGTTCTTGAAGCTGCGGTTGTTGCAAGACCAGATGATCTATGGGGCCAAACTCCTTGTGCATATGTGAAATTGAGAGACGGGGTTGATGCGGATGATGAAGAAATAATAAAGTTTTGCAGGGATCGTTTGCCGCATTTCATGGCTCCTAAAACTGTCATTTTTCTTGATATGCCTAAAACTTCAACAGGTAAGATACAAAAGTTTGTTTTGAGGGAGAATGCCAAGGCCTTGGGAAGCATCTCTGGACCCCTAGATTGTAAAAATTAA 1899 0.4123 MAFILALSNGFGNAQFHHKYKVQIDISKHAACRQERVKTNTITCINSDLKAETCLHRQSQNGRPLPQEIKVNVPGSWESMEGLLHCSANSVPLSPINFLERAAKVCRDRTSLVYGSLTYNWGQTHQRCLKLASSLTQLGISRGDVVATLAPNVPAMYELHFAVPMSGSILCTLNSRLDANMVSILLEHSQAKILFVDCQLVDIARGALDHLSKRSKKKPILVMIMDSNYTSTIDSSSVGYEYEKLVASGRDDFDIVRPKSELDPISINYTSGTTSRPKGVVLSHRGAYLNSLATVLLLQMKLFPVYLWNVPLFHGNGWCLAWGVAAQFGTNVCLRKVSPKNIFDNIVQHRVTYMGGAPTVMNMIANYTLTTNRKLVNHKVEVLTGGSPPPPQILSMMEENGFNITHMYGLTETLGAGSFCAWRPEWDMLPSEERSKIKARQGVPHVGMEEIDVKDPETMESVPADGKTVGEVMFRGNTMMSGYFRDLKATKEAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIIISGGENISSIEVETVLYSHPAVLEAAVVARPDDLWGQTPCAYVKLRDGVDADDEEIIKFCRDRLPHFMAPKTVIFLDMPKTSTGKIQKFVLRENAKALGSISGPLDCKN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03211 632 CDD ttLC_FACS_AEE21_like 91 616 - -
Vivi1g03211 632 PANTHER ACYL-ACTIVATING ENZYME 81 624 - -
Vivi1g03211 632 Pfam AMP-binding enzyme C-terminal domain 534 608 IPR025110 -
Vivi1g03211 632 ProSitePatterns Putative AMP-binding domain signature. 267 278 IPR020845 -
Vivi1g03211 632 SUPERFAMILY Acetyl-CoA synthetase-like 84 618 - -
Vivi1g03211 632 Gene3D - 520 621 IPR045851 -
Vivi1g03211 632 Gene3D - 83 519 IPR042099 -
Vivi1g03211 632 Pfam AMP-binding enzyme 100 525 IPR000873 -
Vivi1g03211 632 FunFam 2,3-dihydroxybenzoate-AMP ligase 520 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03211 Vivi-Chr1 69947798 69954125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03211 156 625 Miscellaneous Gene Families AT1G20560 61.653 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03211 - - tpra:123882444 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03211 1 69947798 69954125 Vivi1g03211 1 69947798 69954125 ECH
Vivi2g02806 2 124072351 124076028 Vivi1g03211 1 69947798 69954125 PCT