Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03204 ATGGCAAACAAGTACCATGTTCGTTCAATTAGTTTGCCTTCTAGATCTCATCCTAGCACCATTAGAGTAACTGAGGATTTGAACAAGCTCAAAGCTTGGGAAGTAACATCCACATCCACTTGTACATCTACATCAGCCTCTATTCATAATGGTCTTTCCTTACTTGAAGATTTGTATATTTCATTGGAACATCTTCTCAACATGCCATCAACTCAACAACTCATTTCTAGTCATAGAGGTGAGAAGTTCGTTGAAGAAGTGTTGGATAGTTCTATGAGAATTTTGGATGTATGTGGCATCACAAGGGACACCATGTTGCAAATCAAGGAAAATGTTCAAGCTCTTCATTCTTCTCTTAGGAGAAGAAAAGGAGATTCATGTGTTGAAACAAGTGTGGCAGAATACAAATTCTTCACAAAAAAGATGAGGAAAAATGTCAACAAGTTGATCACATCTTTGAAGCACATGGATACCAAACTTGGGATGTCTCCAAATTTGGAACTTGATCATCACCTTTCTTCTGTTATTAGAGTTCTTAGGGAAGTTATTACAATGAATTTGTCTGTTTTTCAGTTCATTTTGTCATTTTTAAGTGTGTCTTCGTCAAAGTCAAAGGCTACAAAATGGTTGTTGGTAGCAAAATTGATTCACAAGGGTGTTATAACATGTGAAGACAACTCAGAGAATGGGAATGAGTTGCAGTGTGTGGAAGCTGCTTTAAGCACACTTATAAGTGAAGCCAATAATGGTGAAAAGTTGAAGGCTGCACATGAAAGATTAGAGGGTTTGGAGAATGCTATTGAAAGCATTGAGATTGGATTGGAGAACTTATTTAGACGTTTGATTAAAACAAGATCTTCCCTCTTGAATATAATTTCTCAATGA 885 0.365 MANKYHVRSISLPSRSHPSTIRVTEDLNKLKAWEVTSTSTCTSTSASIHNGLSLLEDLYISLEHLLNMPSTQQLISSHRGEKFVEEVLDSSMRILDVCGITRDTMLQIKENVQALHSSLRRRKGDSCVETSVAEYKFFTKKMRKNVNKLITSLKHMDTKLGMSPNLELDHHLSSVIRVLREVITMNLSVFQFILSFLSVSSSKSKATKWLLVAKLIHKGVITCEDNSENGNELQCVEAALSTLISEANNGEKLKAAHERLEGLENAIESIEIGLENLFRRLIKTRSSLLNIISQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03204 294 Coils Coil 253 280 - -
Vivi1g03204 294 PANTHER OS06G0725500 PROTEIN 2 292 - -
Vivi1g03204 294 Pfam Protein BPS1 51 291 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03204 Vivi-Chr1 69763025 69764189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03204 - - gmx:100811784 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03204 1 69763025 69764189 Vivi1g03204 1 69763025 69764189 ECH
Vivi2g02821 2 124375598 124388116 Vivi1g03204 1 69763025 69764189 PCT
Vivi1g03204 1 69763025 69764189 Vivi2g02822 2 124375598 124388116 PCT