Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03114 ATGGAAGTTTCAGAGAGGAACAAACACCATTACATTCTCTCAGTATTCATCATCCTCTTAGCTTTCATCTTCGACAATGCTCACTGTATCCGGTTCCCGGATCGGGTCGCCCAACCCGCCCGAGACCAAACCGATCAACACCACTTGCAAACGGCCGTTTTCGCTCTCGGAAGTTTCTGGAGATCCGAAGCTGTGTTCGGTTGCTTACCTGGCGTTGTTAGGACCACTGTTGGGTATGCTGGCGGATCTAAACCTAATCCTGAATATCGAAGCTTCGGTGATCACGCTGAATGCGTCCAGGTTGAGTATGATCCACGGGTAATTAGTTTTAGGGAACTACTTGATATTTTTTGGTCAAGCCATGATCCCAGGCAGGTGTATGGCCAAGGTCCTGATGTGGGTAATCAGTACAGATCTATTATTTTTGTTAACGGAACTGAAGAATCACGAATGGCTTCGGTCAGCAAAGAACAGGAGCAAACCAGGTCAAGAAGCAGCATTGTAACTACTCTAATTATTCAACTTGGAACATTTCATCCTGCAGAGTCAGAGCACCAGAAATTTGAACTGAAGCAAAATACCTTCCTTCTTCAGTTAATTGGGAACCTGCCTGAAGAGGAGCTCGAGAGCTCAAGCCTGGCAACGAAATTGAATGGATATGTTGCTGAGCTTTGCCCTCCGAATATCCAAAAGCATATTGATGCAAAGATCAATGAGATTATAAAAAAGGGTTGGCCCATTTTAAGGGAATTGTAA 756 0.4484 MEVSERNKHHYILSVFIILLAFIFDNAHCIRFPDRVAQPARDQTDQHHLQTAVFALGSFWRSEAVFGCLPGVVRTTVGYAGGSKPNPEYRSFGDHAECVQVEYDPRVISFRELLDIFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRMASVSKEQEQTRSRSSIVTTLIIQLGTFHPAESEHQKFELKQNTFLLQLIGNLPEEELESSSLATKLNGYVAELCPPNIQKHIDAKINEIIKKGWPILREL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03114 251 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 51 191 IPR002569 GO:0008113
Vivi1g03114 251 Pfam Peptide methionine sulfoxide reductase 51 192 IPR002569 GO:0008113
Vivi1g03114 251 Gene3D Peptide methionine sulphoxide reductase MsrA 44 245 IPR036509 GO:0008113
Vivi1g03114 251 SUPERFAMILY Peptide methionine sulfoxide reductase 43 193 IPR036509 GO:0008113
Vivi1g03114 251 FunFam Peptide methionine sulfoxide reductase A5 45 246 - -
Vivi1g03114 251 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 49 203 IPR002569 GO:0008113
Vivi1g03114 251 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 25 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03114 Vivi-Chr1 68537184 68541074 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03114 K07304 - gmx:100782739 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03114 1 68537184 68541074 Vivi1g03114 1 68537184 68541074 ECH