Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03096 ATGGCGACGGCGTCGCCGACGACCACCACGACGTCGTTTCTCTCTCCAACTCAGAGGTATGCCGCCGCCGCATTGTTCGGACTATCCCTTCACGAATCCCAAGTCAATCAAACTCGCATTCTACCCTTACCAGCTTTGGTTGACTCCGTCTCCAACTCCGATCGAATCAGTAGTAGTAGCTCTAGCAGCACTGATTCTGTTTCCGATGATCCTGATCTTTGGGTTCACCATCGTTCCGGTTTACTCCAACCCGTTTTCAAGTTTCTAGATATTGATTCATCCGCGTGGTACGGATTAGAGGAAACTGCTGGTTCTTCTTCTGCTACTCATCATGTTGGACCATTTATGAGACTGCTTTCACAAGAATTTGACGAGGGTTCTGCGGAATCTTCTCAAAGGCTAGACCAAGAACTTGCATTGTCAAAAGCCGTTGATGCTATAGTACTTGAGTTGGAAAAGAATTTGCAGACTTCCAACTCTAAAAGAGAGAGGCTTAATGAGTACGAGCATCAGTGTCGCGAGAAGTTTTCGGCTCCTGATGTTCAATCTAATTCTGAGAAGGTTGATGTAAACTTTGAAACTCAGAAAGAGACTGATGTTGCCCCTTTAATCAACTTTGAAGATATAGACCAGGGGTCGAGTAATAGTAAAATTGATGAGAGACCAATTGAAGAAGTGATGATGCTTAGTGATCAGAGGAAAGTGGTGGTTCTCTATGAACTTTTATCTGCTTGTCTGTCAAATTTGGGTGTAGATGACAAAGAATCTAAAAGGAAGAGAAAGGGTTATGATGCTCGTCATCGCGTAGCTTTGCGGTTGTTGGCAACATGGCTTGATGTCAAGTGGACAAAAATGGAGGCCATTGAGACCATGGTTGCTTGTTCTGCAATGGCTATCATTAAAGAGCAAGAATCAAATCAAGAAGAAACTCAAGAAAAAAAAAGCAAGTGGGCGAAATTGAAGCGCGGTGGTATTATTGGTGCTGCTGCAATTACTGGGGGAACCTTGTTGGCTATTACTGGTGGGTTAGCTGCACCAGCAATTGCTGCTGGTCTTGGAGCTCTAGCTCCAACTTTGGGTACACTGATCCCTGTAATTGGAGCCAGTGGATTTGCTGCAGCTGCCGGTGCTGCAGGAACTGTTGCTGGTTCTGTTGCAGTTGCTGCATCATTTGGAGCTGCTGGTGCTGGTCTTACCGGAAGCAAAATGGCTAGGAGAGTAGGGGGTGTTGATGAGTTTGATTTCATATCCATTGGCGAAAACCATAACCAAGGCAGGCTAGGCGTGGAGATCTTGATATCTGGATTTGTCTTTGAGAAGGAAGATTTTATTAGGCCATGGGAAGGACTGAATGACAATTTGGAAAGGTATTCACTTCAATGGGAGTCAAAAAAACTGATTGCTGTGAGCACTGCGATTCAGGATTGGCTAACTTCAAGACTTGCAATGCAGCTGATGAAGCAAGGGGCAATGATGACCGTTTTGAGCACTCTTGTAACTGCTCTGGCTTGGCCAGCTGTATTACTTGCAGCAACTGATTTCATTGACAGTAAATGGACACTAGCTATTAACAGATCAAACAAAGCAGGAAAGTTGCTTGCCGAAGTATTATTAAAAGGATTGCAGGGAAATAGACCTGTGACACTTGTTGGTTACTCTCTCGGGGCAAGGGTTATTTTCAAATGCCTACAGTGTTTGGCTAAAACAGAAAATGGAGCTGAACTAGTAGAAAGAGTTGTACTTCTTGGAGCACCGGTCTCAATCAAGGATGAGAACTGGGAAGCTGCTAGAAAGATGGTAGCAGGAAGGTTTGTTAATGCTTATTCAAGGAATGACTGGATGCTTGGAGTTGCTTTCCGTGCCAGTCTACTTACAAAAGGATTAGCTGGAATCGAACCAGTTGATATTCCTGGGATCCAAAATGTTGATGTCACAGAACACATTGAAGGCCATTCATCTTATCTGTGGGCTACACAACAGATCCTAGACCAACTTCAGTTGGATACATGTTTTCCAGTTTATAATGGTGTTTCTTGCCTACAGTCCAGAGCAGAGCCAGAAATTTGGACAGAGGGAGGGCAAAACCAAAAAATATAG 2097 0.4421 MATASPTTTTTSFLSPTQRYAAAALFGLSLHESQVNQTRILPLPALVDSVSNSDRISSSSSSSTDSVSDDPDLWVHHRSGLLQPVFKFLDIDSSAWYGLEETAGSSSATHHVGPFMRLLSQEFDEGSAESSQRLDQELALSKAVDAIVLELEKNLQTSNSKRERLNEYEHQCREKFSAPDVQSNSEKVDVNFETQKETDVAPLINFEDIDQGSSNSKIDERPIEEVMMLSDQRKVVVLYELLSACLSNLGVDDKESKRKRKGYDARHRVALRLLATWLDVKWTKMEAIETMVACSAMAIIKEQESNQEETQEKKSKWAKLKRGGIIGAAAITGGTLLAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAAGAAGTVAGSVAVAASFGAAGAGLTGSKMARRVGGVDEFDFISIGENHNQGRLGVEILISGFVFEKEDFIRPWEGLNDNLERYSLQWESKKLIAVSTAIQDWLTSRLAMQLMKQGAMMTVLSTLVTALAWPAVLLAATDFIDSKWTLAINRSNKAGKLLAEVLLKGLQGNRPVTLVGYSLGARVIFKCLQCLAKTENGAELVERVVLLGAPVSIKDENWEAARKMVAGRFVNAYSRNDWMLGVAFRASLLTKGLAGIEPVDIPGIQNVDVTEHIEGHSSYLWATQQILDQLQLDTCFPVYNGVSCLQSRAEPEIWTEGGQNQKI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03096 698 Coils Coil 148 168 - -
Vivi1g03096 698 Pfam Protein of unknown function (DUF726) 319 667 IPR007941 -
Vivi1g03096 698 Gene3D alpha/beta hydrolase 471 667 IPR029058 -
Vivi1g03096 698 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 4 674 IPR007941 -
Vivi1g03096 698 SUPERFAMILY alpha/beta-Hydrolases 535 595 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03096 Vivi-Chr1 68303745 68310460 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03096 - - tpra:123921716 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03096 1 68303745 68310460 Vivi1g03096 1 68303745 68310460 ECH