Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03085 ATGGATTCGCTTCCGCCTCTCCCTCCTTGGAATTCAGACGACGATTTTCTCCTCAAAAACGCCATTGAGACTGGAGCTTCGCTGGAATCGCTGGCTAAAGGAGTTGTCTCCTTCTCACGGAGGTATTCACTTAAGGAATTGAGGGAACGGTGGCATTCAGTTCTCTATGATTCCGATGTTTCTGATGAAGTTGCTGTTGCCATGAACAATTTGGAGCTCGCCAAGTCTAACGGTAACGGAACCAAGGAAGTAGTTGCTGCTCCGAAGAGAAAGACGACTCAGACTATTCGCAAGGTATACAACGCCATGCGGAAGAGACTTCGCACTGAGGTTTTTTTTAATTCTTTTGATATGGCTTTATGTGATGACATGTGTGTTGAAAAGTACACCAATGGAAATGAAATTGGTGCGTCTGGTAATGTTAATTGTAGTTTAGATAAGGATGTGAATAAAAATTCGCTTGTCAATAGTCTAGTTAAGGAATGGAATCAGTTGGGGTTAGTGGGAGCTAGGGCGGGGTCATCTCAGTCAATGAGTGAAGATCCAATTCGGAAGATGATTGAGGATGTACCTGCAACTAACACGCCGGTTCGTGTTAGTGTTGAAAATGAAAATGGAGGTTCTGAGTCAAAACAGACGATTCCCCGTGTTTCTGATGCTCTCTTGAAATCTCAGAATGGAGACAAGCTTATGTTAATGGATATAGGTGAGAAAGATGAGACTGCAGCAGATAAGCAGTCTGATGCTAATGTTGATTCAAATGTTTTGACTTCTCCTTGTGACATTCAAGGTGATGGTATGTCGGGTGTTGGTGAGTCTAAGAAGTTGGTTGCAGAAACACAAGTTGCTATGGCAAATGGTCCGTCTGCTGTGTTAGAGGTTGTCGTCAACTCGTCAGGCAGCAGTCATGGTGATGTGGGTTTTGCTTCTGATTGTGAAAATGAAGTCCAATCGTCTAGTGCACTGCAAAAATGTGACCCTAAGCCTGCAAATGAATTTAGGTTATGTTCATTCAACACCGAGGACCCTAATATACCGTCCCCGTCCGACGACAGCAACCATGCAAAAGTATCTGATGTAATTCCTAATTCTGAAAACATATCTGCTGTAGTGGTTCCTAGTTCTATTAACCTAACCGCTCTAGTAGCTCCTAATTCTGTAAACATATCCACTGTATTAGTTCCTAATTCTCCAATTCCGAAACCCATATCGATTGTTAAAGAGGTGGGGTATCCGGATTCCTCTATTACTAATCTAACAAAAAAGGAACCAGATGAAGGCTTGAAGAGAAAAGACACCCCTTCAAGCTCTTTTGCTGCTTCTCAGTCATTTCGACCAGGATTAGTGCCTAATATAAATTCAAGCAAGGGAAATTCAGTTGCTGCTGTACCAAAAATTGAAAATCCTGCTACTATGAAGCATGCCTCATCTGGACATCCGGCACCAGAGGTAGTTATTGCTCTGCCTTCACCTGTTAGCACTCATCCAAAGGAAGAGGAGCATAAGACTTCTTCTAAGATAGAAGAAAAATTGTTATGCATTGATCAACAAAAAGGCGATGCTTATTATGATCATGATAGTGATGAGGAGCATGAAGTTCCTTACTATTCTGATGCTGAGGGAATGATTCTTGAAATGGATTTAGGTCCAACTGATCAAGATACAAATGCTAGCGCCGAAGTGGTAAGATATCAGAGTGATGAAACTAAGAAGACTATCATGAGATTGGAGCAATGTGCCCAGTCTTTTGTGCATAGAGCCATTGCATCTCGAGGTGCACTTGCAGTGTTTTATGGACGCACTCTGAAGACATACATTGAAAAATCCGAGGTGATAATTGGCAGATCAACACCTGACGAAGATGTTGATATTGACTTGGCTAGAGCAACGACAGATGCTCACAAGATATCTAGAAGACAAGCTTCAATAAAGATGGACGCAAGTGGTTCTTTCATGATCAAAAACCTTGGCAAGAGGACTTTATACTTAAATGGCAAAGAAGTTCCTAAAGGACAGATGCGGGGTCTGAGTGCTGGTAGTTTGATCGAGATTTGGGGCTTGGCATTCATCTTTGACGTCAATAAGAAGTGCGTCGAAAGGTTCATAGGAAATGCGAGTGAACATAATGAGATAGAAGAATGA 2142 0.4211 MDSLPPLPPWNSDDDFLLKNAIETGASLESLAKGVVSFSRRYSLKELRERWHSVLYDSDVSDEVAVAMNNLELAKSNGNGTKEVVAAPKRKTTQTIRKVYNAMRKRLRTEVFFNSFDMALCDDMCVEKYTNGNEIGASGNVNCSLDKDVNKNSLVNSLVKEWNQLGLVGARAGSSQSMSEDPIRKMIEDVPATNTPVRVSVENENGGSESKQTIPRVSDALLKSQNGDKLMLMDIGEKDETAADKQSDANVDSNVLTSPCDIQGDGMSGVGESKKLVAETQVAMANGPSAVLEVVVNSSGSSHGDVGFASDCENEVQSSSALQKCDPKPANEFRLCSFNTEDPNIPSPSDDSNHAKVSDVIPNSENISAVVVPSSINLTALVAPNSVNISTVLVPNSPIPKPISIVKEVGYPDSSITNLTKKEPDEGLKRKDTPSSSFAASQSFRPGLVPNINSSKGNSVAAVPKIENPATMKHASSGHPAPEVVIALPSPVSTHPKEEEHKTSSKIEEKLLCIDQQKGDAYYDHDSDEEHEVPYYSDAEGMILEMDLGPTDQDTNASAEVVRYQSDETKKTIMRLEQCAQSFVHRAIASRGALAVFYGRTLKTYIEKSEVIIGRSTPDEDVDIDLARATTDAHKISRRQASIKMDASGSFMIKNLGKRTLYLNGKEVPKGQMRGLSAGSLIEIWGLAFIFDVNKKCVERFIGNASEHNEIEE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03085 713 SMART FHA_2 610 668 IPR000253 GO:0005515
Vivi1g03085 713 SUPERFAMILY SMAD/FHA domain 603 694 IPR008984 GO:0005515
Vivi1g03085 713 Gene3D - 549 701 - -
Vivi1g03085 713 ProSiteProfiles Forkhead-associated (FHA) domain profile. 611 668 IPR000253 GO:0005515
Vivi1g03085 713 MobiDBLite consensus disorder prediction 415 456 - -
Vivi1g03085 713 MobiDBLite consensus disorder prediction 434 456 - -
Vivi1g03085 713 Pfam FHA domain 611 684 IPR000253 GO:0005515
Vivi1g03085 713 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Vivi1g03085 713 PANTHER MICROSPHERULE PROTEIN 1 6 709 IPR037912 GO:0002151|GO:0031011|GO:0071339
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03085 Vivi-Chr1 68171379 68175881 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03085 - - mtr:11408169 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03085 1 68171379 68175881 Vivi1g03085 1 68171379 68175881 ECH