Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03060 ATGGGGGCTGAACCTGAAATTGAAAACGAAAAATGGCGTTACACATGGGAATCACAATCTCACACTCCAATCCTCCGCTTACTCCTTTTCCCATTTTCCAAAACCCTAAACACTTCTCTTCATCACCATACTCACAATCTCACCCTCCACCTTCATTCTCCACCCACTTTCCTCACTCTCACCTCCTCCTCCCTATCCCTTAGGGTTCCGATTCCCAATGTCTTACTCGACGTCGAACTTCCTCCCACCCTCCGCTCTTTCACCGACCATATCGAAGTCAAACTCGTTCTCTTACTCCCTGTCGATCACCCCGCCCTCTCCGCACTTCATCAAACCTCGCCGTTACCTCAACCTCTCCTAATCGAATACGATGTGGACAAACTGTCTTCCGCTGGAGAAGTTGAATTTGTTTGTAGAAGTTGCAGATATCATTTGACCGATAAGCCTATCAGGAATTTTGTGGAAATGCCGTCGGCGAATTGGAGGGAGGTTGCTGACAATTGGTTTGGGGCTTGTTGTTGTTCGTTTGGAGGTATAAGTGAGAAGCTTGTGACGAGGTATGTGAATTCTCACACGTGTGCACAAGGGATGTGTCTGTTGAGCTCTACATCTGTCACTATTTGCAAGGATGATCTTGTGGAAAGTGACTTTCCTGAGCGGTGTGGACAGCTGCACGGGTGTAGCCATGTAGCCGATGATTTTGGAATCGATGCTGTTAGTGAAGATGTTGGGAATTTCGGGTTGAATGAGGAAAGAACTTCAACCTGCAATGATGTTTGTGAAGTGAAATGTGCTTTTGATGAGAATGCAAGGGTTTCCCATCCTGGGAATGGAAAGCTTTCTAATGAACCTGATTGCAGTGATTTTGCTCGTATAAGTCTAGATTTGAATGACACTGAACACACGTCCAATATTCCTAGTTGTTGTACTCATATAACGGGCACTCCAGGAGATGAAGACGGTGAACATCATTTATCTTCAAATGCTAGGAAGATTGAAACTGCGGAAATTGTGGGAAATCAGAAGTCTTTACTTAATGGTTTTCTTGAAGATGTTTTCATGGCTAGATCATCAAATCTTTCAAAGAATATTGATTGGCATGAATTTACATGCCCGCAATGCACAACTCTCCTTGGAGCATACCCATGTTGTGAGGGATGTGCGCCTGTAGATGGAGGAGTACGACTGTTCAAGTGTTATATTTCAACGCGTCTGCCAGTTTTAGGATCCGAGGACATTTTCAGCAAGTACACAATGGACAAAATGTTTGCGAATCGGTTGGTGGAGTGTGCAAATGACGAGTCAACATTTCGGTTCGTTGTTAGAGATCTGAAAACCAAATCTCCTGTCCTGCAAATCATTCTTTTAAATCTAGATACATGGTCCTGTTCTGGTTATTGCTTTAGTGCAGCGGACAAAGACCCAGATCCTAAATTACAGCTATGGCCGGTCATCAAGGTCCTTTTTTCTGACTCCGAAGCTGCAACAGAATCCCAATCAAGGGTGATAGAGGAATGGGCAGCTAAGAATTCGGCCGAAGACATTTTCATGCTAACTTATCAAATACAAGACGTGGTGAACTCATTGATGTCTGCAAAAGATATATATCCTCCTTCATGTGCCTCGGTTCCTGGTTTAGCATTGTCATATGTGCAACGCTAG 1662 0.4416 MGAEPEIENEKWRYTWESQSHTPILRLLLFPFSKTLNTSLHHHTHNLTLHLHSPPTFLTLTSSSLSLRVPIPNVLLDVELPPTLRSFTDHIEVKLVLLLPVDHPALSALHQTSPLPQPLLIEYDVDKLSSAGEVEFVCRSCRYHLTDKPIRNFVEMPSANWREVADNWFGACCCSFGGISEKLVTRYVNSHTCAQGMCLLSSTSVTICKDDLVESDFPERCGQLHGCSHVADDFGIDAVSEDVGNFGLNEERTSTCNDVCEVKCAFDENARVSHPGNGKLSNEPDCSDFARISLDLNDTEHTSNIPSCCTHITGTPGDEDGEHHLSSNARKIETAEIVGNQKSLLNGFLEDVFMARSSNLSKNIDWHEFTCPQCTTLLGAYPCCEGCAPVDGGVRLFKCYISTRLPVLGSEDIFSKYTMDKMFANRLVECANDESTFRFVVRDLKTKSPVLQIILLNLDTWSCSGYCFSAADKDPDPKLQLWPVIKVLFSDSEAATESQSRVIEEWAAKNSAEDIFMLTYQIQDVVNSLMSAKDIYPPSCASVPGLALSYVQR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03060 553 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 3 552 IPR019193 -
Vivi1g03060 553 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 88 540 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03060 - - cam:101505599 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03060 1 67575156 67578731 Vivi1g03060 1 67575156 67578731 ECH