Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03050 ATGGGACTACACATGAATGGGAGCGCTGAAGAAGTAAGCTATGCGAAAAACTCCTCACTTCAGCGAAAGGCCATTTCTTTGACAAAACCTTTGAGAGATGAAGCCATAACAAGTTTGTACTGCAACACACTGCCCAAAAGCTTGGCAATTGCAGACTTAGGTTGCTCTTCTGGACCAAACACATTGTTAGTGATCTCAGAATTTATCAAGGTGGTGGAAAATCTTTGTCGAGAACTTAATAAAAAATCTCCTGAATATAAAGTCTTTTTGAACGATCTATCGGAGAACGACTTCAACAGCGTATTTAAGTCTCTTGATACCTTCAAAGAAAACCTATACGATGAAATGAAAACTGAAATAGGTCCTTGCTACTTCTTTGGAGTTCCTGGTTCCTTTTATGGCAGGACTTTTCCAGATAAAAGTTTGCATTTTGTTCATTCCTCTAACAGTCTTCATTGGCTTTCAAAGGTTCCAGAGGGTGTAGACAACAACAACAAGGGCAATATTTACCATTCTAGCACAAGCCCTTCAAATGTCCTCAAAGCCTACTACCAGCAATTTCAAAGAGATTTTTCTCTTTTTCTCAAGTGTCGTGCCCAAGAAATAGTTGAAGGTGGTCGCATGATTCTAACAGTTACAGGAAGAAAAATTGATGATCCATCAAGTAAAGGGTCTTGCTACATTTGGGATCTCATGACAATAGTTCTTAATGACATGGTCTTGCAGGGAATTATTGACAAAGAGAAACTCGATACCTTCAACATCCCAACATATTTTCCTTCTCCATCTGAACTGAAGAGAGAAGTTTTCGAGGAAGGATCATTTGCAATCAATAAACTGGAGATTTCTGAAGTGAATTGGAATGATCGTGATTGCGGGGAAGTTTTGGACATTGAATCTGAAATGTCAAAATCGATCAAAGACGATGGATACAATATGGCACAATGCATCAGGGCTGCGATTGAATCATTACTGGTTTGTCACTTTGGTGATAGTGTCATTGAAGAGATTTTTTATCGCTATAAAAATATTTTAAATGATCGAATGTCTAAAGAGGTAACCAAGATCACCTATCTTACCTTATTGTTGACTAGAAAACCTTGA 1104 0.3804 MGLHMNGSAEEVSYAKNSSLQRKAISLTKPLRDEAITSLYCNTLPKSLAIADLGCSSGPNTLLVISEFIKVVENLCRELNKKSPEYKVFLNDLSENDFNSVFKSLDTFKENLYDEMKTEIGPCYFFGVPGSFYGRTFPDKSLHFVHSSNSLHWLSKVPEGVDNNNKGNIYHSSTSPSNVLKAYYQQFQRDFSLFLKCRAQEIVEGGRMILTVTGRKIDDPSSKGSCYIWDLMTIVLNDMVLQGIIDKEKLDTFNIPTYFPSPSELKREVFEEGSFAINKLEISEVNWNDRDCGEVLDIESEMSKSIKDDGYNMAQCIRAAIESLLVCHFGDSVIEEIFYRYKNILNDRMSKEVTKITYLTLLLTRKP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03050 367 Gene3D - 3 352 IPR042086 -
Vivi1g03050 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 366 IPR029063 -
Vivi1g03050 367 FunFam Jasmonate O-methyltransferase, putative 27 158 - -
Vivi1g03050 367 Pfam SAM dependent carboxyl methyltransferase 34 365 IPR005299 GO:0008168
Vivi1g03050 367 Gene3D Vaccinia Virus protein VP39 17 286 IPR029063 -
Vivi1g03050 367 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 4 352 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03050 Vivi-Chr1 67237769 67240082 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03050 K21483 - gmx:106796370 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03050 1 67237769 67240082 Vivi1g03050 1 67237769 67240082 ECH