Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03028 ATGAGTCTAGAAATGGCAGCGGAATCATCGGAAGGCGAAGAAGAAGGAAAGTTAAGCGGCGGCAACCAGATATTGACTGTCGACGACGACCTCCGAGAATTGGGGAAAAAGGCCGCCTGGAGCGTCAGTTCCTGCAAACCCGGCAACGGCGTTTCTTCACTCCGAGACGACAATCTCGAAACCTATTGGCAATCTGATGGAGCTCAACCTCATTTTGTTAACATTCAGTTCCAGAAGAAAGTTCGACTTCAATTAGTGGTGCTTTATGTGGATTTCAAGCTTGATGAAAGTTACACTCCCAGTAAGATTTCCATTCGTGCTGGAGATGGCTTTCACAACCTCAAGGAGATAAAAGCTGTGGAACTTGTGAAACCAACTGGTTGGCTTTATCTTTCATTATCTGGACTTGATCCTCGTGAAACTTTTGTCAACACATTTATGTTACAAATTGCTGTGTTGTCCAATCATCTCAACGGAAGGGATACTCATGTGCGGCAGATCAAAGTTTATGGGCCTAGACCGAACCCCATTCCACAGCAGCCATTTCAATTTACTTCTAGAGAGTTCATTACTTATTCTACTATAAGATGA 591 0.4399 MSLEMAAESSEGEEEGKLSGGNQILTVDDDLRELGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVELVKPTGWLYLSLSGLDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPFQFTSREFITYSTIR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03028 196 FunFam Anaphase-promoting complex subunit 10 5 173 - -
Vivi1g03028 196 SUPERFAMILY Galactose-binding domain-like 26 172 IPR008979 -
Vivi1g03028 196 CDD APC10 32 171 IPR016901 GO:0005680|GO:0031145
Vivi1g03028 196 MobiDBLite consensus disorder prediction 1 22 - -
Vivi1g03028 196 PIRSF APC10 6 196 IPR016901 GO:0005680|GO:0031145
Vivi1g03028 196 ProSiteProfiles DOC domain profile. 10 196 IPR004939 -
Vivi1g03028 196 Gene3D - 2 173 - -
Vivi1g03028 196 Pfam Anaphase-promoting complex, subunit 10 (APC10) 25 193 IPR004939 -
Vivi1g03028 196 PANTHER ANAPHASE-PROMOTING COMPLEX 10 13 196 IPR016901 GO:0005680|GO:0031145
Vivi1g03028 196 SMART APC10_2 31 195 IPR004939 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03028 K03357 - gmx:100526925 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03028 1 66767032 66770448 Vivi1g03028 1 66767032 66770448 ECH