Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03023 ATGGTGAATCTCGTGGAAGCACAAAAACCATTGATGCATGCTCTGATGAAAATGGCAGGAATAAGACCCTACACAGTAGAGATAGAACCAGGAACCGAAATGAGTTTCTGGGTACCTTCAGAAACCATAACAAAACCCAAGAAAAAAGAAGAAAAACCCTTAATCATCGCGAAACCCACCAAACCCGTGGTTGTCCTAGTCCACGGTTTCGCCGCAGAGGGAATAGTCACATGGCAGTTTCAAGTTGGCGCGTTAACAAAAAAGTACGCTGTCTATGTTCCGGATCTTCTGTTCTTCGGAGGCTCTGTCACAGACAAAACAGACAGATCGCCGAGGTTTCAAGCGGAGTGTTTGGCGACAGCGTTGAGGAAACTCGGTGTTGAAAGGTGTATCGTTGTTGGTTTTAGTTATGGTGGAATGGTGGCGTTTAAGATGGCGGAGATGTATCCGGAACTGGTTGAGGCTATGGTTATATCAGGGTCTATTTTGGCTATGACTGATTCCGTTATTGTTAGTAGTTTGCAAGAACTTGGATTTTCTTCTTCTTCTGAACTTCTGTTGCCGAATTCTGTGAAAGGTCTTAAAACGCTTTTGTCTGTTGCTGCTTATAAAAAGCTTTGGTTTCCAGATCGTTTGCACAGAGATTATCTTCAGGTGATGTTCACTAATAGGAAGGAGCGAAGTGAGCTATTAGAGGGCTTAGTAATTAGCAATAAAGAAAATAACATTCCAAGCTTCTCACAGAGGATACATCTTCTATGGGGTGAAAATGATCAAATTTTCAAATTGGAACTTGCTCAAAATATGAAAGAGCAACTAGGAGATGGCACAACGTTTGAAGGCATAAAGAAAGCTGGTCATCTTGTTCATTTGGAGAGACCATGTGTCTACAATAGATGCCTCAAGCACTTTATTGCTTCCTACTTGGCGTCAAATAAAACCAAATAA 948 0.4177 MVNLVEAQKPLMHALMKMAGIRPYTVEIEPGTEMSFWVPSETITKPKKKEEKPLIIAKPTKPVVVLVHGFAAEGIVTWQFQVGALTKKYAVYVPDLLFFGGSVTDKTDRSPRFQAECLATALRKLGVERCIVVGFSYGGMVAFKMAEMYPELVEAMVISGSILAMTDSVIVSSLQELGFSSSSELLLPNSVKGLKTLLSVAAYKKLWFPDRLHRDYLQVMFTNRKERSELLEGLVISNKENNIPSFSQRIHLLWGENDQIFKLELAQNMKEQLGDGTTFEGIKKAGHLVHLERPCVYNRCLKHFIASYLASNKTK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03023 315 Gene3D alpha/beta hydrolase 8 309 IPR029058 -
Vivi1g03023 315 PANTHER SI:DKEY-122A22.2 1 306 - -
Vivi1g03023 315 Pfam alpha/beta hydrolase fold 62 165 IPR000073 -
Vivi1g03023 315 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Vivi1g03023 315 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Vivi1g03023 315 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Vivi1g03023 315 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Vivi1g03023 315 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Vivi1g03023 315 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Vivi1g03023 315 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Vivi1g03023 315 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Vivi1g03023 315 SUPERFAMILY alpha/beta-Hydrolases 18 305 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03023 Vivi-Chr1 66507955 66514164 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03023 - - gmx:100816070 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03023 1 66507955 66514164 Vivi2g03047 2 129921571 129923104 ECH
Vivi1g03023 1 66507955 66514164 Vivi1g03023 1 66507955 66514164 ECH
Vivi2g03047 2 129921571 129923104 Vivi1g03023 1 66507955 66514164 PCT