Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02996 ATGAGATATAGGATTACGTATTTGATGGATGAGATCTGGGAGAGGGCTGTGGAAACGGCGTTAGAAGGCGAGAAAGACCACGCCTCTGCTCGGACGTTAACCCTTGACGGCGCCGTTAAGTGTGTGCAAGGACGTTTACCTCCTCCGAGCCTTCTAGAGAGGTTCCAGAACCTTCAGCACCTTTCGATTGCGAACGTTGGGGTTTCTTCTCTGGAGCAGTTCCCGAGGCTCCGGAGTCTTCAGAAGTTGAACCTCTCCGACAACCGGATCGCCGGAGGACTTGAGTATTTGGTTCAAGCGGGACTCGATTCGCTGCGAGACCTCGATCTGTCGAACAATAGGATTCAATCGATCGAGGATCTCGCTCCGTTAGCAGAGTTGAAGCTTGTTTCGTTGGATCTGTATGAGTGTGCTGTTACTCGTGTTAAGGATTATCGATCTAGGGTTTTTGGTTTGATTAAGTCGCTTAAGTTCTTGGATAAGATGGATGCGGAGGAGAACGAGAGGCCGGAGTCAGATGATGAGGAGGATGAGGATGAAGAGGAGGAGGAAGAGGAGGAGGATCCTGGGAGTGGTGAGATTGATGGAGGAGAAGAAGATAGACCGTTTGGGATGAGCAATGGTCATAGTGAGGGGGTTGATGGAGTTGTCGATGCTGATGAGGAAGAGGAGAGTGATGCGGATGAGGAGGTGACAGAGACTTCCAGGGGGAGGGTGAATGGGGTGAACCATCAGGAGAATGGGTTCCATGTTGCCCCTGCTGTGGGTGATGATGTAGAGGAGGAAGATGATGATGAGGATTCCGGGGAAGAGATTGACGAGGAGGAGGGTGATGATGATGATGTGGTTGAGGTTCATGAGATTGATGATAGTGATGATGATGACGATGGGGTTGAGTTTGATGAGGATGATGATGATGACGATGATGATGAAGAGGTTGATAATGATGAAGGGGATTTTGCTGAACCTGAAAGTACTTCTGGACGGTTGGTGAGTACTGAAGGCGAGATTGATGGGCATGAGCAAGGGGAGGAAGATGGAGATGAAGATGACAACGGGGAGACTGGTGAAGATGAGATGGGAGTAGATGAAGATGAAGATGACGATGATGATGATGGAGAGTTTGAAGACGAAGATGAAGAAGAGGACTTTGGTGCTGGATATCTTGTTCAGCCAGTTGGACAGGCTGAGGCTCTCAATGACGATGCTGCTGAGATTTTCGAAGTGGAAAACGAGGAAGGTGAAGAGGAGGAAGAAGTTGACGATGATGAAGACGATGATGTTCAAGAAGTGTTACCTCCTTCCTCTTCACACCCCAAGAGGAAGAGGGACAATGATGGTGAAGACGAAGATGAAGACGAAGATGAAGCAGCACTCACAAAGCCATCCAAGAAGCACCATTGA 1404 0.49 MRYRITYLMDEIWERAVETALEGEKDHASARTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRSLQKLNLSDNRIAGGLEYLVQAGLDSLRDLDLSNNRIQSIEDLAPLAELKLVSLDLYECAVTRVKDYRSRVFGLIKSLKFLDKMDAEENERPESDDEEDEDEEEEEEEEDPGSGEIDGGEEDRPFGMSNGHSEGVDGVVDADEEEESDADEEVTETSRGRVNGVNHQENGFHVAPAVGDDVEEEDDDEDSGEEIDEEEGDDDDVVEVHEIDDSDDDDDGVEFDEDDDDDDDDEEVDNDEGDFAEPESTSGRLVSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVDEDEDDDDDDGEFEDEDEEEDFGAGYLVQPVGQAEALNDDAAEIFEVENEEGEEEEEVDDDEDDDVQEVLPPSSSHPKRKRDNDGEDEDEDEDEAALTKPSKKHH 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02996 467 MobiDBLite consensus disorder prediction 339 385 - -
Vivi1g02996 467 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 20 451 IPR045081 -
Vivi1g02996 467 MobiDBLite consensus disorder prediction 167 194 - -
Vivi1g02996 467 MobiDBLite consensus disorder prediction 408 467 - -
Vivi1g02996 467 MobiDBLite consensus disorder prediction 408 430 - -
Vivi1g02996 467 SUPERFAMILY L domain-like 48 164 - -
Vivi1g02996 467 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Vivi1g02996 467 SMART LRR_sd22_2 102 123 - -
Vivi1g02996 467 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 13 175 - -
Vivi1g02996 467 MobiDBLite consensus disorder prediction 163 392 - -
Vivi1g02996 467 SMART LRR_typ_2 102 125 IPR003591 -
Vivi1g02996 467 SMART LRR_typ_2 77 100 IPR003591 -
Vivi1g02996 467 Pfam Leucine-rich repeat 64 173 - -
Vivi1g02996 467 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Vivi1g02996 467 MobiDBLite consensus disorder prediction 216 230 - -
Vivi1g02996 467 MobiDBLite consensus disorder prediction 257 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02996 Vivi-Chr1 65637739 65640731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02996 - - mtr:11406731 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02996 1 65637739 65640731 Vivi1g02996 1 65637739 65640731 ECH