Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02958 ATGGTGGAAGGAATGGAGGAATTGCCAGGGGCCTTAGGAACCAGTTCTAGTTTTGCTCTGAGATTGGGACAAACCGTTTTTTCATCTGCTTCCCTTTGTTACATGTGTTTGGGTGTTGATTTCTATGGTTATTCTGCTTTCTGCTTTTTGGTAATGGTGATGGGTTTGGTAATTTCGTGGAGCACAACATTATTGATGGTAGACGCATATTCGATCTTTATCAAAAAAGTACCGAAGCAACCAAGATTCATTTTTACGATCACAGTGGGCGACATGGTTTTGTCATATCTGTTATTAGCTGCAGCATGTTCAACTGCTAGTGTGACAGATTTGTTGAAGAGTGCTGATAAATCGTATTGTCCAGATAATTTATGTAGTAGATACCAAATATCTGCTGTCATGGCCATTTTGTCTTGGTTCCTTTCATCAGCTTCTTGTCTAATTAACTTTTGGATTTTTCCATCTCTGTGA 471 0.3907 MVEGMEELPGALGTSSSFALRLGQTVFSSASLCYMCLGVDFYGYSAFCFLVMVMGLVISWSTTLLMVDAYSIFIKKVPKQPRFIFTITVGDMVLSYLLLAAACSTASVTDLLKSADKSYCPDNLCSRYQISAVMAILSWFLSSASCLINFWIFPSL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02958 156 Pfam Casparian strip membrane protein domain 13 141 IPR006702 -
Vivi1g02958 156 PANTHER CASP-LIKE PROTEIN 5B3 5 155 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02958 Vivi-Chr1 64544193 64547091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02958 - - gmx:100306215 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02958 1 64544193 64547091 Vivi1g02958 1 64544193 64547091 ECH