Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02956 ATGGGGAGAATTTTAATGCAGTATTTGACCTCGAAAACGGAACCTGTTGTAGCTAATTTAATAGATTCTGATTTCAATGAACTCAAACTTGCAGCAACGAAACTTTTTAATGATGCGACTATGTTAGGAGGCAAAGGTTTTGGCATGTCTCTCCTTAGATGGATCGCTTCCTTTGCTGCTATTTATCTACTGGTTCTGGATCGCACCAACTGGAGAAGCAATATGTTGACTTCATTATTAGTGCCTTACATATTCTTCAGTTTTCCTGGTTCTTTATTTCACTTTTTCAGAGGAGAAGTTGGAAAATGGATTGCTTTCGTTGCGGTCGTGTTGAGGCTTTTCTTCAATAAACATTTTCCAGATTGGATGGAGATGCCAGGATCAATGATTCTTCTAGTGGTAGTATCCCCAGACTTGTTTGCTCTAAAGTTTAGGAACAATTGGATTGGAGTGGCAATTGATCTTTTAATTGGTTGTTACTTGCTACAAGAACATGTGAGAGCTACAGGTGGATTCAAAAATTCTTTCACACAAAGACATGGAATATCTAACACTCTTGGCATTATCTTCCTCATAGTTTACCCAATTTGGGCATTGTTTATCCATTAA 609 0.3777 MGRILMQYLTSKTEPVVANLIDSDFNELKLAATKLFNDATMLGGKGFGMSLLRWIASFAAIYLLVLDRTNWRSNMLTSLLVPYIFFSFPGSLFHFFRGEVGKWIAFVAVVLRLFFNKHFPDWMEMPGSMILLVVVSPDLFALKFRNNWIGVAIDLLIGCYLLQEHVRATGGFKNSFTQRHGISNTLGIIFLIVYPIWALFIH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02956 202 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 7 201 IPR008892 GO:0016020
Vivi1g02956 202 Pfam Cold acclimation protein WCOR413 13 191 IPR008892 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02956 Vivi-Chr1 64471310 64472237 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02956 - - gmx:100810337 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02956 1 64471310 64472237 Vivi1g02956 1 64471310 64472237 ECH