Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02918 ATGGCGCAATGGTGGCGCTCCGCCGCCGGCCATCTCCGATCAGCGGAAGCAAACCGTACGTCCTCTTTATCATCACTCCGCCGTAGTCATTACCACACAATCCAAGCAATCCCAAGAGAAAGCACGGGCAGTAAAGTCGCAGCCAGAGACAGAAAGCAAGGTCGAATACCGGCCGTCGTTTTCTTCCAGAACCTTCTTGACAAAACCCCCGACTCACGATCTACGTCAAGGAAACATCTACTCACCGTCGAGAAGAAGCAGATTAAGGCAGTGCTCAATTCCGTTGAAGATCCGTTCTTCTGTTCCACCCGTTTTCCGCTCCAGATTCGTGCTGGATCCGGATCCACTCATTTGCTTGAAAGCGGAACTGTGTTACCCATCAAGATTCATAAGGACAAAGAGAGTGGAAATATTTTGAACTTGGTGTTTGTTTGGGCTGAAGATGGCACGAATTTGAAGGTTGATGTTCCGGTTGTTTTCAAAGGTGAAGATGCTTGCCCTGGTCTTCAGAAAGGTGGTGTTTTGAATAAGATCAGACCTAGTCTAACTTATCTTTGTCCTTCTGAGAACATTCCTTCAAAAATTGAGGTGGATATCAGCAATTTAGATATTGAAGATAGGATATTCATGCGTGATATTGAGGTTCATCCATCTTTGAAGCTTCTGAGTAAGAATGAAAACATGCCCATTTGTAAAATAGTTTCAACAAGTGTTGGAAACCAAGAACCAGTTGTTGAAAGTGCATTTGAGGAAAGAAATGCAGAGACTTCCAAAACGGAGGGTTAA 786 0.4466 MAQWWRSAAGHLRSAEANRTSSLSSLRRSHYHTIQAIPRESTGSKVAARDRKQGRIPAVVFFQNLLDKTPDSRSTSRKHLLTVEKKQIKAVLNSVEDPFFCSTRFPLQIRAGSGSTHLLESGTVLPIKIHKDKESGNILNLVFVWAEDGTNLKVDVPVVFKGEDACPGLQKGGVLNKIRPSLTYLCPSENIPSKIEVDISNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKIVSTSVGNQEPVVESAFEERNAETSKTEG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02918 261 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 149 236 - -
Vivi1g02918 261 Pfam Ribosomal L25p family 34 140 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Vivi1g02918 261 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 22 237 - -
Vivi1g02918 261 CDD Ribosomal_L25_TL5_CTC 33 143 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Vivi1g02918 261 Pfam Ribosomal protein TL5, C-terminal domain 152 235 IPR020057 -
Vivi1g02918 261 SUPERFAMILY Ribosomal protein L25-like 38 234 IPR011035 GO:0006412
Vivi1g02918 261 Gene3D Ribosomal protein L25, beta domain 150 228 IPR037121 -
Vivi1g02918 261 Gene3D Ribosomal Protein L25; Chain P 32 144 IPR020056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02918 Vivi-Chr1 63674123 63676467 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02918 K02897 - gmx:100802599 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02918 1 63674123 63676467 Vivi1g02918 1 63674123 63676467 ECH