Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02604 ATGGATCAGTTGTCGGCGATCAGCGAGGATCTGGCGGAGATCGACGGACGCGTCGCCGACAATTTCCGCGCTCTATCAAATGGATTTCAGAAACTGGAGAAGATTAAGGATTCGAGTAGGAAGAGCAGGCAATTGGAAGAGCTCACCGAGAAAATGCGAGAGTGTAAAGGGCTTATTAAAGAGTTCGATAAAGAAGTCAAAGTTTTGGAGTCTAGATTTGACAGAGAAACTACCAAATATTTGAATGAGAAAAAGCAGTCAATGATCAAAGAGTTAAACTCATATGTTGCTTTGAAGAAACAATATGCTTCAAATATTGAGAATAAGCGAATTGAACTCTTTGAGGGACCCAATGAAGGTTACACAGAAGAAAATGTCTTGTTGGCTTCCGCTATGTCAAATGAACAGCTAATGGATCAAGGGAATCGGATGATGGATGACACAGATCAAGCCATCGAGAGGGGAAAAAGGATTGTTCAAGACACGGTTAATGTTGGTACTGAGACTGCAGCTGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAGTTGTGAATGAGCTGGATTCTATCCATTTCTCTATAAAGAAAGCATCTAAGTTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGCATTGCTTTTCCTCATTGTCATTGGAGTAATTGCTATCATTATTGTAAAGCTTGTTCATCCAGGCAACAAGGACATTCGCGACATTCCAGGATTAGCTCCTCCTGTCATGAACAACAGAAGACTGCTTTGGAATCACAGTTGA 789 0.4183 MDQLSAISEDLAEIDGRVADNFRALSNGFQKLEKIKDSSRKSRQLEELTEKMRECKGLIKEFDKEVKVLESRFDRETTKYLNEKKQSMIKELNSYVALKKQYASNIENKRIELFEGPNEGYTEENVLLASAMSNEQLMDQGNRMMDDTDQAIERGKRIVQDTVNVGTETAAALKAQTEQMSRVVNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIIIVKLVHPGNKDIRDIPGLAPPVMNNRRLLWNHS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02604 262 Pfam Sec20 150 231 IPR005606 GO:0005484|GO:0006890
Vivi1g02604 262 Gene3D - 133 212 - -
Vivi1g02604 262 FunFam novel plant SNARE 11 133 212 - -
Vivi1g02604 262 Coils Coil 45 65 - -
Vivi1g02604 262 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Vivi1g02604 262 SMART tSNARE_6 137 204 IPR000727 -
Vivi1g02604 262 SUPERFAMILY SNARE fusion complex 132 205 - -
Vivi1g02604 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Vivi1g02604 262 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 24 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02604 Vivi-Chr1 54769233 54773666 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02604 K08494 - gmx:100786429 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02604 1 54769233 54773666 Vivi1g02604 1 54769233 54773666 ECH