Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02531 ATGCCGTCTTTGCGAAGGAATGGTAGTTTGGAAAGGGTGCCAGATAGCGAGAAAAAGAGTAATACTATGGTATACCTTAATGTGTATGATCTTACGCCTGCCAATAATTATCTTTACATGTTTGGTGTCGGGGTCTTTCATTCCGGTATAGAAGTGCATGGCATGGAATATGGCTTTGGAGCTCATGAGTACCCGACGAGTGGAGTATTTGAGGTGGAACCTAAAAGTTGTCCGGGCTTTATCTACAGACGATCAGTATTGTTAGGCAGCACCGATATGTCTTATTCACAATTCCGTTCTTTCATTGAGCGTCTATCCGCGAAATATCATGGAGACAGTTACCATCTGATTGCTAAGAATTGCAACCATTTTACGGATGAAGTTTGCCAAGAGTTAACTGGAAAGCCTATCCCCGCATGGGTAAATCGGTTGGCCCGTGTTGGTTCTTTTTGCAATTGTCTTCTGCCCGAAAGCCTTCAGGTTGAGGCTGTCAGACATCAACCTGATCATATTCCACATTCCGATGAAGAGGAAACAGAATCTGAAGACCATTCTGTGTCCGATGATAGTGAAGAGGAAGATTCGAATCACCATTTGCTAGATCCACAGAATGGCGTTGTCTCGTTTATAAAGGAAAAACCAGTTGCTGAATGA 654 0.4327 MPSLRRNGSLERVPDSEKKSNTMVYLNVYDLTPANNYLYMFGVGVFHSGIEVHGMEYGFGAHEYPTSGVFEVEPKSCPGFIYRRSVLLGSTDMSYSQFRSFIERLSAKYHGDSYHLIAKNCNHFTDEVCQELTGKPIPAWVNRLARVGSFCNCLLPESLQVEAVRHQPDHIPHSDEEETESEDHSVSDDSEEEDSNHHLLDPQNGVVSFIKEKPVAE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02531 217 MobiDBLite consensus disorder prediction 168 217 - -
Vivi1g02531 217 PANTHER DESUMOYLATING ISOPEPTIDASE 21 195 IPR008580 GO:0008233
Vivi1g02531 217 ProSiteProfiles PPPDE domain profile. 22 159 IPR008580 GO:0008233
Vivi1g02531 217 SMART DUF862_2a 22 160 IPR008580 GO:0008233
Vivi1g02531 217 Gene3D PPPDE domains 16 173 IPR042266 -
Vivi1g02531 217 Pfam PPPDE putative peptidase domain 23 157 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02531 Vivi-Chr1 53205760 53208075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02531 K22763 - gmx:100814439 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03755 2 148442832 148445532 Vivi1g02531 1 53205760 53208075 PCT