Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02473 ATGGAAGACCCCCTTGCAGAACTGGAACGAGTCCAAACCCACATCCTCCAACGCATATCAAAACTCGAACAACATTCTCATCTTCCAACAAACCCCCCTCTCACCAACGACCCTAAATCTCTCCCCGACACCGACACGGTCTCTCGTCTCTCTTCCATTTTACGCAGCAACGCCGTTAACGATTTCTCCTTCAAGAGAGTCGCTTCCGATTACTACGACTGGCCCCTCGAAGCCCGCCGTGATGCTCTTAACGCCGCATCGGTTCACCATCTTTGTAAAAGCATCGTTTTAGTTAACACGCAAGCTCCATCCAATGTCGTTGATTGTTCTGATCGAAATAATTCTAAGTACTATGTTGTCGTTGTTCAGTATAGTGCTCGGTTCAATGCTGAAGCTGTGAGAAATTTTTTATACTCTCTCAACAATGGAACTATAGCCAAAAAGAAATTCAACTTGAGGCTAGCCCCTGAGGAGATATCAGCAAAGTTAACCGGATATGGGCACAATGCCGTGACTTGTATTGGCATGAAAACAGACATTCCGGTGATTTTGGATGAAGCAATTGTTAAACTAACTCCAGATTTCTTTTGGTTGGGTGGTGGTGAGGTTGATCTGAAGCTAGGGGTCCGGACGTCCGAGTTAATCAGATTTATCAACCCATTCATCATCAGCTGTAGTAGTAATTAA 687 0.4498 MEDPLAELERVQTHILQRISKLEQHSHLPTNPPLTNDPKSLPDTDTVSRLSSILRSNAVNDFSFKRVASDYYDWPLEARRDALNAASVHHLCKSIVLVNTQAPSNVVDCSDRNNSKYYVVVVQYSARFNAEAVRNFLYSLNNGTIAKKKFNLRLAPEEISAKLTGYGHNAVTCIGMKTDIPVILDEAIVKLTPDFFWLGGGEVDLKLGVRTSELIRFINPFIISCSSN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02473 228 Pfam Aminoacyl-tRNA editing domain 87 217 IPR007214 GO:0002161
Vivi1g02473 228 CDD YbaK_like 77 223 - -
Vivi1g02473 228 PANTHER UNCHARACTERIZED 35 227 - -
Vivi1g02473 228 MobiDBLite consensus disorder prediction 23 42 - -
Vivi1g02473 228 SUPERFAMILY YbaK/ProRS associated domain 62 224 IPR036754 GO:0002161
Vivi1g02473 228 Gene3D - 64 226 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02473 Vivi-Chr1 52196718 52200582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02473 - - gmx:100815424 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02473 1 52196718 52200582 Vivi1g02473 1 52196718 52200582 ECH