Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02465 ATGGCTTCCAAGGTTGCTATAATCCTTGCCCTCAACATCCTCTTTTTCACAGCTGTAACCTCCAACTATGTTCCATGTCCTCCACCACCCACAAAAGATCACAGTCACTCACATCCAAAGAACCCAACATGTCCTAAAGACACAATTAAGTTTGGTGTGTGTGCTGATGTATTAGGTTTGATTAATGTTGAACTTGGTAAGCCACCAAAGACACCATGCTGTTCTCTCATTGATGGTCTTGCTAATCTTGAAGCTGCTGTCTGTCTTTGCACTGCTCTTAAGGCTAATGTCTTAGGCATTAACCTTAACCTTCCCATTAATCTGAGCTTGATACTTAATTACTGTGGAAAGGGAGTTCCAAAGAAGTTCGTTTGCGCTTAA 381 0.4173 MASKVAIILALNILFFTAVTSNYVPCPPPPTKDHSHSHPKNPTCPKDTIKFGVCADVLGLINVELGKPPKTPCCSLIDGLANLEAAVCLCTALKANVLGINLNLPINLSLILNYCGKGVPKKFVCA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02465 126 SMART aai_6 44 125 IPR016140 -
Vivi1g02465 126 Gene3D - 37 126 IPR036312 -
Vivi1g02465 126 FunFam pEARLI1-like lipid transfer protein 1 42 126 - -
Vivi1g02465 126 Pfam Hydrophobic seed protein 43 126 IPR027923 -
Vivi1g02465 126 CDD HPS_like 41 125 IPR027923 -
Vivi1g02465 126 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 47 125 IPR036312 -
Vivi1g02465 126 PANTHER - 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02465 Vivi-Chr1 52049768 52050511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02465 43 125 Acyl Lipid Metabolism Gene Families AT4G22490 35.294 1.78e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02465 - - mtr:11440205 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02465 1 52049768 52050511 Vivi1g02465 1 52049768 52050511 ECH