Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02463 ATGGCTTCCAAAACTTGTTCCTCCCTTGCAATTTTCCTCACAATAAACCTCCTCTTTTTCTCCCTTGTTTCAGCTTGTGGCTCCTACTCATGCAACCCTACTCCAAAACCAACTCCAAAACCAAAGCCAAACCCAACTCCTAACCCTACCCCTTCAAGTGGAACATGCCCACGTGATGCTCTTAAGCTCGGTGTATGTGCCAATGTCCTAAATGGATTGTTGAATCTAACATTGGGACAACCGCCAGTGAAACCATGTTGCACCCTTCTTGATGGCCTTGTTGATCTTGAGGCTGCAGTGTGTCTTTGCACTGCCCTTAAAGCCAACGTTTTGGGCATTCATCTTAACCTTCCCATCTCACTTAGCTTGCTTCTCAATGTTTGCTCAAAGAAAGTTCCACGTGGTTTCCAGTGTGCCTAA 420 0.4595 MASKTCSSLAIFLTINLLFFSLVSACGSYSCNPTPKPTPKPKPNPTPNPTPSSGTCPRDALKLGVCANVLNGLLNLTLGQPPVKPCCTLLDGLVDLEAAVCLCTALKANVLGIHLNLPISLSLLLNVCSKKVPRGFQCA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02463 139 FunFam pEARLI1-like lipid transfer protein 1 54 139 - -
Vivi1g02463 139 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vivi1g02463 139 MobiDBLite consensus disorder prediction 34 52 - -
Vivi1g02463 139 PANTHER - 7 138 - -
Vivi1g02463 139 MobiDBLite consensus disorder prediction 33 54 - -
Vivi1g02463 139 Gene3D - 53 139 IPR036312 -
Vivi1g02463 139 Pfam Hydrophobic seed protein 55 139 IPR027923 -
Vivi1g02463 139 SMART aai_6 56 138 IPR016140 -
Vivi1g02463 139 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 58 138 IPR036312 -
Vivi1g02463 139 CDD HPS_like 54 138 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02463 Vivi-Chr1 51968280 51969073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02463 46 138 Acyl Lipid Metabolism Gene Families AT4G22490 39.785 3.59e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02463 - - gmx:100801985 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02463 1 51968280 51969073 Vivi1g02463 1 51968280 51969073 ECH