Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02453 ATGCTTGCAGAGTTTTCAGAATTACAAGAGCAGCTTAAAATTCTTTGTCAAGAACGATCAAGTTTGTTTGATACGATTAGGCAGTTGGAGGCAGCTAACATTGAACCTGAGGGCTCTGCCTTGCATGACAGTGAATACCAACTAACAAAGAATGGATTTTCAAATCTAGGGCGTGGAAAATATAGTGAATGCAGTACAACGGAATCATCTGATGATATCGAGAAACAAGAGGTAGAAGAAGTGTCTGAAGAAGATGAAATATCATATTATGATAGTAGAGACTATTTTACAGAACCTGGTTTTAGGTGTGGGTCAAATACGTTGGATCAAGTGAACATGTCCGGGGAAGCTAATAGACAATGCCTTGATGTGGAAAACAGCCATGTTGAAACAATGACATATGATTATGGGTATCCTCAAATTGCAAGGCGAAAAAAGCTTCCGGATCCTGTTGAGAAGGAGAAGGGCGTTAGTCTTTGGTCAATGATCAAAGACAATGTGGGCAAAGATCTCACACGCGTTTGTCTTCCTGTATACTTTAATGAACCAATCTCATCCCTTCAGAAATGTTTCGAGGATTTGGAGTATTCTTATCTTCTGGATAGAGCTTATGAGCATGGAAAATCGGGAAACAGCCTCCTCCGGGCACTGAATGTTGCCGCCTTTGCTGTTTCTGGATATGCATCGTCTGAAGGTCGGCTTTGTAAGCCTTTTAATCCCTTGTTAGGGGAAACTTACGAAGCCGATTTTCCTGACAAAGGAGTTCGGTTCTTTTCTGAGAAGGTTAGTCACCATCCAACTGTGGTTGCCTGCCATTGTGAAGGTAGAGGATGGAGGTTTTGGGCAGACAGTAACATTCATTCAAAGTTTTGGGGAAGGTCAATTCAACTTGATCCTGTTGGAGTTCTGACACTTGAATTTGATGATGGTGAAATATTTCAGTGGAGCAAGGTTACTACTACAATTTATAATCTTATCCTTGGCAAATTATACTGTGGTCATCATGGGAATATGGAAATCCGTGGTAATCGCCAATATTCATGCAGGCTCAAGTTCAAAGAGCAAACCATTCTTGACCGAAATCCTCGCCAGGTAAATGGATTTGTTGAAGATACAACGGGTAAAAAAGCAGCCACAATATTTGGCAAGTGGGATGACAGCATTTATTATTTTGACGGTGATGTGAATGTCAAGCCTAAAGATTATACTTCGTCCAGTGGATCATTGTTGTGGAGAAGGACTAAGCCACCACCAAATCTCACTCGTTACAATTTGACATCATTTGCCATAACACTGAATGAGCTTACACCAGGACTAAAGGAGAAGCTTCCACCAACGGATTCCAGGCTGAGACCTGATCAGCGGCACTTAGAGAATGGGGAATATGAGAAGGCTAATATGGAGAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAGAATGGTTGGGAGCCAAGGTGGTTTCGCAAAGAAGGTGAAAATGGAACATTTCTATATACCGGCGGGTATTGGGAAGCTAGAGATGTAGGAACATGGGATGGATGCCCAAACATATTTGGTGAATTTCAAGAAAGCATCGTTGAAACCTTATGA 1605 0.415 MLAEFSELQEQLKILCQERSSLFDTIRQLEAANIEPEGSALHDSEYQLTKNGFSNLGRGKYSECSTTESSDDIEKQEVEEVSEEDEISYYDSRDYFTEPGFRCGSNTLDQVNMSGEANRQCLDVENSHVETMTYDYGYPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEHGKSGNSLLRALNVAAFAVSGYASSEGRLCKPFNPLLGETYEADFPDKGVRFFSEKVSHHPTVVACHCEGRGWRFWADSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKLYCGHHGNMEIRGNRQYSCRLKFKEQTILDRNPRQVNGFVEDTTGKKAATIFGKWDDSIYYFDGDVNVKPKDYTSSSGSLLWRRTKPPPNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWEPRWFRKEGENGTFLYTGGYWEARDVGTWDGCPNIFGEFQESIVETL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02453 534 Gene3D - 454 512 - -
Vivi1g02453 534 FunFam Oxysterol-binding protein-related protein 2A 454 525 - -
Vivi1g02453 534 Coils Coil 455 484 - -
Vivi1g02453 534 FunFam oxysterol-binding protein-related protein 1D isoform X1 244 415 - -
Vivi1g02453 534 Pfam Oxysterol-binding protein 158 511 IPR000648 GO:0008289
Vivi1g02453 534 Gene3D - 244 411 - -
Vivi1g02453 534 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 511 IPR000648 GO:0008289
Vivi1g02453 534 SUPERFAMILY Oxysterol-binding protein-like 153 529 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02453 Vivi-Chr1 51648511 51656927 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02453 K20456 - gmx:100812205 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02453 1 51648511 51656927 Vivi1g02453 1 51648511 51656927 ECH