Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02421 ATGGAGTGGTCTGCTTGTACGGACGAGTACGAGAAGCTTGTTTTTCGTATGAGCACTCCCAGGGTTGTCATTGACAATGCGGTTTGCACCAATTCAACTATAGTGAAGTTTGATAGTGCTAGAAAGCATGGAATTCTTTTGGAAGCGGTGCAGATTCTCAGCGATCTGAACCTTTTCATTAAGAAAGCATATGTTTCCTCTGATGGCAGATGGTTCATGGATGTTTTTCATGTTACGGATCAAGATGGAAATAAGTTGACAGATGAGAGTGTTTTGAAGTATATTGAACAGTCACTTGGTAGCATTCACAATGGAAAAATCAATCATAGAAATGGTCTCACTGCTTTGGAATTAAAGGGGACGGATCGTGTTGGTCTTCTTTCTGAAGTGTTTGCAGTATTGGCTGAGTTTCAATGCGATGTGGTTGAGGCTAAAGTTTGGACACATAATGGCCGGACTGCTTCGTTAATTTATGTTAAGGATTGCACCTCTGGAACCTCTATTGAAGATTCTCAGAAAATTAGTCGGCTCGAAGCACGTTTGAGATATGTTTTACAAGGAGATAGTGATATCAGGAGTGTAAAAACATCTATCTCTGATGTTGTTATTCACCCTGAAAGAAGGCTCCACCAGATGATGTTTGCCGACCGTGATTATCAGAAGAGTCCGATTTTAAAGTTCACTTCAGAAACACCGTTAGTGACTGTTCAAAATTGGGCTGAAAGGGGTTATTCGGTTGTTAATGTCCAGTGCAAGGATCGCGTCAAGTTATTGTTTGATGTTGTGTGCAATTTGACAGACATGGAATATGTTGTGTTCCATGCAACTATCAACACAAGGATTGATCAAGCATACATGGAGTTTTATATAAGACATAAGGATGGCACCCCGATTAGTTCAGAACCGGAGCGTCAACGGGTGATTCAATGCTTGCAAGCGGCTGTAGAGAGAAGATCATGTGAGGGTGTTAGACTAGAGTTATCAACGGAAGACAGACAAGGGCTTCTAGCCGAGGTGATGAGAACGTTCCGAGAGAACGGGTTGAATGTGACTAGGGCAGACATAACCACGACCGGTGACCTGGCCGCAAATGTTTTCTACGCAACAGATGCCATTGGATACCCGGCTGACCAAAAAATCATCGAGTCGGTTAGAGAGAAAATTGGGTTAAGCAATTTAAAAGTGAAGGAGTTGCCTATTGTAAGTCATGAGAAGGCAGGGAGGGAAGATCAATCAGTTGGAGTTGGCGGGGCAGTGCTATTGTCCCTTGGGAGCATTGTGAGAAGGAATCTATACAATTTGGGTTTAATCAAATCTTGTTCTTGA 1326 0.4253 MEWSACTDEYEKLVFRMSTPRVVIDNAVCTNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSSDGRWFMDVFHVTDQDGNKLTDESVLKYIEQSLGSIHNGKINHRNGLTALELKGTDRVGLLSEVFAVLAEFQCDVVEAKVWTHNGRTASLIYVKDCTSGTSIEDSQKISRLEARLRYVLQGDSDIRSVKTSISDVVIHPERRLHQMMFADRDYQKSPILKFTSETPLVTVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRIDQAYMEFYIRHKDGTPISSEPERQRVIQCLQAAVERRSCEGVRLELSTEDRQGLLAEVMRTFRENGLNVTRADITTTGDLAANVFYATDAIGYPADQKIIESVREKIGLSNLKVKELPIVSHEKAGREDQSVGVGGAVLLSLGSIVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02421 441 CDD ACT_ACR_3 244 318 - -
Vivi1g02421 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Vivi1g02421 441 SUPERFAMILY ACT-like 111 185 IPR045865 -
Vivi1g02421 441 SUPERFAMILY ACT-like 321 393 IPR045865 -
Vivi1g02421 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Vivi1g02421 441 CDD ACT_ACR_1 33 103 - -
Vivi1g02421 441 SUPERFAMILY ACT-like 29 97 IPR045865 -
Vivi1g02421 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Vivi1g02421 441 Pfam ACT domain 324 384 IPR002912 -
Vivi1g02421 441 Gene3D - 113 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02421 Vivi-Chr1 50883417 50886232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02421 - - gmx:100794729 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02421 1 50883417 50886232 Vivi1g02421 1 50883417 50886232 ECH