Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02348 ATGTTCACCGCAACCAAAGTAGCTTTCACATTAACACCCCCTCGTCCATGTTCTACACCTCCCCCAACACCTTCCGTTCCAATCTCTTCTTCTCTTTCTCGTCCTCACCTTATTCACTTCAACTCCCGTCGATTATGCCTTCGCCGGAGACTTTTCCTACTTTCACCTAAAGCCACCGCAGATCAACAAGGGAAGGTTGAAGAATTTGAAGGAGATGCTGTTGATAGTAATGTTCTTCCGTATTGTAGCATAGATAAAAAAGATAAGAAATCCGTTGGTGAACTCGAGCAAGAGTTTCTTCAAGCGCTCCAATCGTTCTACTATGAGGGAAAGGCCATTATGTCGAATGAAGAATTTGATAATCTCAAGGAAGAACTCATGTGGGAAGGAAGCAGTGTTGTTATGCTAAGTTCGGATGAACAGAAATTTCTTGAAGCTTCTATGGCATATGTGTCTGGAAATCCAATTTTGAATGACAAAGAGTATGATGAGTTGAAAATGAGGCTAAAGAGGGAAGGGAGTGAAATTGTTGTTGAGGGTCCAAGGTGCAGTCTTCGAAGTAAAAAGGTTTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTTCTGCTGAATGTCCCAGCCACCGTGATTGCATTAGGATTGTTCTTCTTCCTTGATGATCTGACTGGATTTGAAATCACTTACTTGCTGGAGCTTCCGGAGCCTTTTAGTTTCATTTTCACTTGGTTTGCGGCTGTTCCTCTCATCGTATATCTAGCTCTATCACTAACAAGGGCCATTATTAAAGATTTTGTGATTTTAAAGGGTCCCTGTCCAAACTGCGGAACTGAAAATACCTCCTTCTTTGGGACTATACTGTCAATTTCAAGTGGTGGTTCCGACAACAAAGTCAAATGCTCTGAATGTGCAACTGAAATGGTGTATGATTCAACTACAAGATTGATTACATTGCCAGAAGGAAGTAAATAA 972 0.4115 MFTATKVAFTLTPPRPCSTPPPTPSVPISSSLSRPHLIHFNSRRLCLRRRLFLLSPKATADQQGKVEEFEGDAVDSNVLPYCSIDKKDKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILNDKEYDELKMRLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVIALGLFFFLDDLTGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKGPCPNCGTENTSFFGTILSISSGGSDNKVKCSECATEMVYDSTTRLITLPEGSK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02348 323 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 29 314 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02348 Vivi-Chr1 49678345 49681770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02348 - - gmx:100784314 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02348 1 49678345 49681770 Vivi1g02348 1 49678345 49681770 ECH
Vivi1g02348 1 49678345 49681770 Vivi2g03792 2 149161971 149164299 PCT