Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02339 ATGGGATTCCCATCCAACGGTTCGGATGAAAAGTCCCTCAAGTTTCTAATATACGGTCGCACCGGCTGGATTGGCGGACTCTTGGGCAAGCTCTGCACAGCCCAAGGGATCCAATTCGAGTACGGGTCGGGCCGTCTCGAGAACCGATCCTCCCTGGAGTCTGACTTAGCGGCGGTTAAGCCAACACATGTCTTCAACGCTGCCGGTGTTACGGGCCGACCCAACGTGGACTGGTGTGAGACGCATAAGGTGGAGACTATCCGGGCTAATGTGGTGGGGACGCTTACTCTTGCTGATGTGTGCCGTGAAAGGGGACTTGTTGTTATTAATTTTGCTACTGGGTGTATTTTTGAGTATGATGAGGGGCATACTCTTGGATCCGGGGTTGGATTTAAGGAAGAGGATACTCCGAATTTTATTGGGTCGTTTTACTCCAAGACTAAGGCTATGGTAGAGGATTTACTCAGGAACTATGACAATGTATGTACGTTGAGAGTCAGGATGCCTATTTCATCCGATTTATCCAACCCTCGCAATTTCATCACAAAGATATCTCGATATGAGAAGGTTGTCGATATTCCAAACTCAATGACCATATTGGATGAACTTCTTCCAATCTCCATAGAGATGGCAAAGAGAAATCTCACTGGAATTTGGAACTTCACAAACCCCGGAGTTGTTAGCCACAATGAAATCTTACAGATGTACAAAGAATATATCGATTCTGACTTCACCTGGAAGAATTTCACTCTCGAGGAACAAGCCAAGGTGATAGTTGCTCCGAGAAGTAACAATGAGCTAGATGCAGGCAAATTGAAGAAGGAGTTTCCAGAACTGTTGTCTATTAAGGAGTCACTCATTCAGAATGTGTTCAAGCCAAATCAGAAGGTTAAAGCTTGA 900 0.4567 MGFPSNGSDEKSLKFLIYGRTGWIGGLLGKLCTAQGIQFEYGSGRLENRSSLESDLAAVKPTHVFNAAGVTGRPNVDWCETHKVETIRANVVGTLTLADVCRERGLVVINFATGCIFEYDEGHTLGSGVGFKEEDTPNFIGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPRNFITKISRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILQMYKEYIDSDFTWKNFTLEEQAKVIVAPRSNNELDAGKLKKEFPELLSIKESLIQNVFKPNQKVKA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02339 299 Pfam RmlD substrate binding domain 14 186 IPR029903 -
Vivi1g02339 299 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 12 296 IPR005913 -
Vivi1g02339 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 274 IPR036291 -
Vivi1g02339 299 CDD dTDP_HR_like_SDR_e 14 286 - -
Vivi1g02339 299 Gene3D - 4 299 - -
Vivi1g02339 299 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02339 Vivi-Chr1 49239401 49241273 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02339 K12451 - ini:109183545 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02339 1 49239401 49241273 Vivi1g02339 1 49239401 49241273 ECH