Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02338 ATGCATCCACCATGCTCTGGAGGAACATGCTCACAACCTTGCTTCAATGGTTGTTTTCCATCTCCATTTCTTGCCTCTGAGGCCTCCCATAACAACACTAACACTTCAAACTCAAATAAAAATGACTTAACCGCAGCCACAACCTCAAGTCTTTATCCAAACACACAATTCACAAACCATGAATCTCTCCCACTTTTACAAGACTCATACAATGGCTTCATCAAAGCATTCCCTCAATTTTCCACAACTTTCGAAATAGATCGAATCCGAGCACAAGAATATCATCACTTGAATAATAATCCCTCGAATATATGTTTCGATTACACAGGATATGGCCTTTTCTCTCATTCTCAGCATCAAAAACCAAGTTCAGCTGCTGCTGCTTCTACTTCATCATCATCATCATCATCTACTCCTTACTTGAACTTAGAACAATCGTTCTTCGATGTATCCATTAAGTCGATGAACTTGAAGTCACAGATACTCTACCGCGGACAAGAATCGAAACTAGAATCAAGAATTAGAGAAAGAATAATGACATTCATGAATGTGTCCGAAACTGATTACGCCTTAGTTTTCATTGCGAATGAGGTATCTGCTTTTAAACTTATAGCTGATTCATTCCATTTTCAATCTAAAGGATCAGAGCTTCTCACAGTTTATGATCATAACAATGAAGCATTAGAAATTATGATTGATAGCTGCAAGAAACAAGGAGTAAAAATTCTATCAGCAGAATTCACTTGGCCCAATCTAGCAATGGAATGGACAAAACTGAAGAAAATGATAAAAAGTAAAAAAGAGAAGAGAAAAAGTGGTTTATTTGTTTTTCCACTTTATTCAAAGGTTACTGGATCACCATATTCATATTTTTGGATGTCTATGGCACAAGAAAATGGTTGGCATGTTTTGCTTGATTTATGTGCATTGAGACCTAAAGAAATGGATACTTTAGGTTTGTCTATGTTTAAACCTGATTTCATGGTTTGTTCATTCTACAAGATTTTCGGAGAAAACCCGTCTGGATTTGGTTGTTTATTTGTCAAAAAATCAAGTCTTTCTTCTCTCAGAGACTTAGGTAATGCTACAAGCATAGGAATTATAAGCCTTAATCCGCCGAATAATACTCAAAAGCCGAACTCCGAATTACCAGAATCTTCTACTCCGAATCCGAGGATCAATGAGGAATCATCTTCATCAAAATCAGAAATTGTGGAGCTTCAAGGTATGAAAATGAATGATGAAAGATTGGAAATTGAGTGTAGAGGATTAGAGCATGTAGACAAAGTGGGACTAATTGTGATTAGTACAAGCACAAGGTATTTGATTAATTGGCTTGTTAATGCATTAATGAGTCTTCAACATCCACATGATGAAAATAGATTTTCATTGATTAGAATCTATGGTCCAAAGATTAACTGTCATCGTGGATTTTCTGTAGCATTTAATATATTTGACTGGAAAGGAGAAAAAATTGATCCAGGACTTGTTCAAAAGTTAGCTGATAGAAATAATATCTCATTAAGTAGGTCATGTTTGAGGAATATCAAGTTCTTAGATAAGAGCCAAGAAGAGAGGGAATGGGCTTTGGAAAGTAAGGCAACTGAGGTTGAGAAGATGGGCCTGTCCAAGAAGAAGAAAAGCCCAGGTGAGAATGGGATATTGGTTTTGTCTGCTACATTGAGCTTCTTGACAAACTTTGAAGATGTTTATAGGTTATGGGCATTTGTTTCTAGGTTTCTTGATGCAGATTTTGTGGAGAAAGAGAGATGGAGATACATTGCTCTAAATCAAAAAACTATTGAAGTTTGA 1812 0.3609 MHPPCSGGTCSQPCFNGCFPSPFLASEASHNNTNTSNSNKNDLTAATTSSLYPNTQFTNHESLPLLQDSYNGFIKAFPQFSTTFEIDRIRAQEYHHLNNNPSNICFDYTGYGLFSHSQHQKPSSAAAASTSSSSSSSTPYLNLEQSFFDVSIKSMNLKSQILYRGQESKLESRIRERIMTFMNVSETDYALVFIANEVSAFKLIADSFHFQSKGSELLTVYDHNNEALEIMIDSCKKQGVKILSAEFTWPNLAMEWTKLKKMIKSKKEKRKSGLFVFPLYSKVTGSPYSYFWMSMAQENGWHVLLDLCALRPKEMDTLGLSMFKPDFMVCSFYKIFGENPSGFGCLFVKKSSLSSLRDLGNATSIGIISLNPPNNTQKPNSELPESSTPNPRINEESSSSKSEIVELQGMKMNDERLEIECRGLEHVDKVGLIVISTSTRYLINWLVNALMSLQHPHDENRFSLIRIYGPKINCHRGFSVAFNIFDWKGEKIDPGLVQKLADRNNISLSRSCLRNIKFLDKSQEEREWALESKATEVEKMGLSKKKKSPGENGILVLSATLSFLTNFEDVYRLWAFVSRFLDADFVEKERWRYIALNQKTIEV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02338 603 SUPERFAMILY PLP-dependent transferases 99 358 IPR015424 -
Vivi1g02338 603 Gene3D Aspartate Aminotransferase, domain 1 410 579 IPR015422 GO:0003824
Vivi1g02338 603 MobiDBLite consensus disorder prediction 370 404 - -
Vivi1g02338 603 Gene3D - 156 389 IPR015421 GO:0003824
Vivi1g02338 603 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 67 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02338 Vivi-Chr1 49186968 49189074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02338 - - tpra:123887281 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02338 1 49186968 49189074 Vivi1g02338 1 49186968 49189074 ECH