Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02288 ATGAACTTTAAGCTCAACGTGATTATTACTCTAGTACTAGTAGCAACCTTAACATGCTTCGTCTTGGGTTTTGCTCATGCTAATGGATTCGGTGAACAACCACTCTCCAAAATCGCTATTCACAAAACCGTTGTTTCACTCCACACTACTGCCTCTGTTACAGCCACTCCTTCAATTCTCGGCACTAAGGGTGAAGATACTCAATGGGTCACTGTTGATTTTGATTTTCCTCATCCATCTCTTGATGATTGGATTGGAGTTTTCTCTCCTGCAAATTTCAATTCATCAACATGCCCACCTGTAAATGATCCGAAAGAACAGGTTCCGTTTATATGTACGGCCCCAATTAAGTACAAGTTTGTGAATTACTCAAACTCAGACTATATCAAGAAGGGAAAAGCTTCTTTGAGATTTCAGTTGATCAATCAACGTGCGGATTTCTCCTTCGCGCTATTCTCCGGCGGAATATCAAATCCTAAACTTGTGGCTGTTTCCAATTTCATATCATTTGCTAATCCTAAAGCGCCGTTGTATCCTCGTCTGGCTCAAGGGAAGTCTTGGGATGAAATGACAGTTACATGGACAAGTGGATATGGTATAAATGAAGCAACACCTTTTGTTGAATGGGGTTCTGGGGGAAAAACGCCCGGGCAAAGTCCTGCTGGAACATTGACATTTGATCGTAACAGCATGTGTGGTTCACCTGCACGAACGGTTGGTTGGCGTGACCCTGGTTTCATACACACAAGTTTTCTCAAAAATCTGTGGCCAAATTTAGTGTATACATACCGATTAGGTCATCTTTTGTCTAATGGTTCGTACATTTGGAGCAAGAAGTATTCGTTCAAATCATCGCCTTATCCCGGACAGGACTCACTGCAGCGTGTTGTCATATTTGGTGACATGGGCAAAGCCGAGCGTGACGGTTCAAATGAGTATAGTAACTACCAGCCTGGGTCATTAAACACCACTGATCAGCTTATCAAAGATTTAAAAAATATAGACATTGTTTTCCACATAGGAGATATATCATATGCAAATGGATACATCTCCCAGTGGGACCAGTTCACAGCTCAAGTGGAACCAATTGCATCAACAGTACCATATATGATTGCCAGTGGTAATCACGAACGTGATTGGCCCGACACAGGATCCTTTTACAACACCACAGATTCAGGCGGCGAGTGTGGAGTTTTGGCTGAGACCATGTTTTATGTTCCAGCTGAAAATAGAGCAAAGTTTTGGTATGCAACGGATTATGGCATGTTTCGCTTCTGCATAGCTGACACTGAACATGATTGGCGAGAAGGATCTGAACAGTACAAATTCATTGAGCATTGTCTTGCAACAGTAGACAGACAAAAACAACCATGGTTGATCTTTGCGGCTCATCGTGTACTTGGATATTCCTCTGACTTTTGGTATGGGTTGGAAGGGTCATTTGAAGAGCCGATGGGAAGGGAAAGTTTGCAGAGACTTTGGCAGAAATATAAAGTAGATATTGCATTTTATGGCCATGTCCATAACTATGAAAGGACATGCCCCATTTATCAGAATCAATGCGTGAATACAGAAAAATCTCATTATTCAGGCATAGTGAATGGAACAATTCACGTTGTTGTCGGAGGAGCAGGAAGCCATTTGTCCAATTTCAGCCAAGTAACTCCAAAGTGGAGTCTTTACAGAGACTATGACTTTGGGTTTGTCAAGTTAACAGCATTCAATCATTCATCCCTACTATTTGAATACAAAAAAAGTAGCGACGGAAACGTCTACGACTCTTTTTCTGTTTCAAGGAATTACAGAGATGTCCTAGCTTGTGTGCATGATGGTTGTGAACCGACCACCTTAGCATCTTGA 1860 0.4188 MNFKLNVIITLVLVATLTCFVLGFAHANGFGEQPLSKIAIHKTVVSLHTTASVTATPSILGTKGEDTQWVTVDFDFPHPSLDDWIGVFSPANFNSSTCPPVNDPKEQVPFICTAPIKYKFVNYSNSDYIKKGKASLRFQLINQRADFSFALFSGGISNPKLVAVSNFISFANPKAPLYPRLAQGKSWDEMTVTWTSGYGINEATPFVEWGSGGKTPGQSPAGTLTFDRNSMCGSPARTVGWRDPGFIHTSFLKNLWPNLVYTYRLGHLLSNGSYIWSKKYSFKSSPYPGQDSLQRVVIFGDMGKAERDGSNEYSNYQPGSLNTTDQLIKDLKNIDIVFHIGDISYANGYISQWDQFTAQVEPIASTVPYMIASGNHERDWPDTGSFYNTTDSGGECGVLAETMFYVPAENRAKFWYATDYGMFRFCIADTEHDWREGSEQYKFIEHCLATVDRQKQPWLIFAAHRVLGYSSDFWYGLEGSFEEPMGRESLQRLWQKYKVDIAFYGHVHNYERTCPIYQNQCVNTEKSHYSGIVNGTIHVVVGGAGSHLSNFSQVTPKWSLYRDYDFGFVKLTAFNHSSLLFEYKKSSDGNVYDSFSVSRNYRDVLACVHDGCEPTTLAS 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02288 619 Gene3D - 175 288 - -
Vivi1g02288 619 SUPERFAMILY Metallo-dependent phosphatases 294 600 IPR029052 -
Vivi1g02288 619 PANTHER PURPLE ACID PHOSPHATASE-RELATED 19 603 - -
Vivi1g02288 619 Gene3D - 289 603 IPR029052 -
Vivi1g02288 619 SUPERFAMILY Purple acid phosphatase, N-terminal domain 154 286 IPR008963 GO:0003993|GO:0046872
Vivi1g02288 619 Pfam Iron/zinc purple acid phosphatase-like protein C 535 594 IPR025733 -
Vivi1g02288 619 CDD MPP_PAPs 294 599 IPR041792 -
Vivi1g02288 619 Pfam Purple acid Phosphatase, N-terminal domain 181 283 IPR015914 GO:0003993|GO:0046872
Vivi1g02288 619 Pfam Fn3-like domain from Purple Acid Phosphatase 53 172 IPR040974 -
Vivi1g02288 619 Pfam Calcineurin-like phosphoesterase 295 510 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02288 Vivi-Chr1 48368790 48373485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02288 44 597 Miscellaneous Gene Families AT1G13900 30.882 1.67e-67 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02288 K22390 - gmx:100814531 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02288 1 48368790 48373485 Vivi1g02288 1 48368790 48373485 ECH