Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02283 ATGGCGGATCCGATCCCAGCGCATCACAGATCCGCCACCAACCTCTTCTCCGATCCACTCGACTCCCACCCGCTCTGGTTCAAACCGGCATCCTTCCTCTCCCCTGACTTCGATTCCGAATCCTACATTTCCGAACTCCGAACCTTCGTTCCCTTCGATACTCTCCGTTCAGAGCTTAACAACTACCTTTCGTCGCTGAATCATGAACTCATTGATCTAATTAACCGCGATTACGCTGATTTTGTTAACCTAAGTACTAAGCTTGTTGATGTGGACGCTGCTGTGGTGAGGATGAGGGCGCCGCTGGTGGAGCTTAGGGAGAAGATTGAGCAGTTTAGGGGATCTGTGGATGTGTCGCTTGTGGCTATTAAGAATGGTTTGAAGCAAAGATCTGAAGCGGCTTCGGCGAGAGAGACTTTGGAGCTTCTCCTCGATACGTTTCACGTTGTTTCTAAGGTTGAAAAACTAATAAAAGAGCTTCCCAGTGTACCCTCTGACTGGTCAAATGGAGATGTGAGTTTACCGGAGAAAAATTCATTGAGCAATGGGGTTTCTGTGCATGAGAACGGCACAAGTGTCAGAGAGACTCAAAGTATGCTGCTGGAAAGAATTGCCAGCGAGATGAACAGGCTAAAATTCTATGTTACACATGCAAAGAACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTATTAGTAGATGCAAGCCTGGGACATTGCTTTGTTGATGGTCTTGAACACCGGGATGCAACTGCAATTTACAATTGCTTACGTGCATATGCTGCCATTGATAACACCAAGAATGCAGAAGAAACCTTCCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGGTCATCAGCTGTGGCTGCTGGATCATCTGGGGATGGGCTTGAAAATGATTATCAACAAATTAAGGAGTGCATTGATAGAGACTGTAAATTTTTATTGGATATTTCTTCAGCTGAAAATTCAGGTTTACACGTCTTTGACTTCTTGGCCAATTCAATCCTTAGAGAGGTCCTCTTTGCTATTCAGAAGGGAAAACCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAATTCTAGCTTGGAGTTCTTGGCTTTTCTAGAAGGCCACTGTCCGTCCAGATCTGCTGTGGCTAAATTTCGATCCGAAACTATTTATACCGAGTTCATGAAGCAATGGAATCTTGGAGTGTATTTTTCGTTGAGATTTCAGGAAATAGCAGGGTCTTTAGATTCTGTACTGACAACATCCAGTCTTGTCCCCATTCCAAATTTAGATCCCGGCGAAGCAAATTATCAAGACTTAACACTAAAACAAAGTGTAACTCTGTTGGATAGTTTGAGATTTTGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAAGTTCCTTCGCCTATCCTTGCAGCTTCTTTCTAGATACTCAAATTGGCTGTCATCTGGATTGACTGCACGCAAGAGTCACAGTACAAGCACTAGCACTGGGCGCGAATGGGCTGCTTCAGCTGTCATAGATGACTTTATCCTTGTTATTCATGATATCAGATGTTTGGAGGAGCATGTTCGTGGTGATTACTTACAACATGTGGTCCAGGTTTTATCTTCATGCTCCTTCGATGTTCTTGAATCAGTAAGGCAGAGCATTTTACAGAGTGGTCAATCCTTGAAATCTTTAGAACCCTTAGTCGTCAAAGCAGTGGTGGAGTCACTGGTAGAAAAGTCAGTCGAGGACTTGAGACAAATGAAGGGGATAACTGCAACTTACAGGATGACTAATAAACCTCTACCTGTTAGGCATTCACCATATGTTACGGGAGTATTACGTCCACTAAAGACTTTTTTGGATGGGGAAAGAACCTCTAGATATTTGGCAAGTGAAACTAAAAAGGAAATACTCCTTTGTGCTGCAACAGAGATTACTGACCGTTATTATGAATTAGCTGCCGACCTTGTTAGTGTGGCAAGAAAGACAGAATCTTCACTTCAGAAAATTAGACAGAGTGCACAAAGACGAGCAGGGGCAAGTTCAGACATATCCGATAATAACGTGTCTGACACTGACAAAATGTGCATGCAGTTATTCCTTGATATTCAGGAGTATGCCCGCAACCTATCTGCCCTAGGGGTTGAAGCAGTTAATATTCCATCCTATCGTTCATTATGGCAGTGTGTGGCTCCAGCAGATAAGCAGAATACGATTAAATTATAA 2262 0.4319 MADPIPAHHRSATNLFSDPLDSHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAAVVRMRAPLVELREKIEQFRGSVDVSLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVSLPEKNSLSNGVSVHENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLLVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEETFRVTVVAPLIQKIIPHGSSAVAAGSSGDGLENDYQQIKECIDRDCKFLLDISSAENSGLHVFDFLANSILREVLFAIQKGKPGAFSPGRPTEFLKNYNSSLEFLAFLEGHCPSRSAVAKFRSETIYTEFMKQWNLGVYFSLRFQEIAGSLDSVLTTSSLVPIPNLDPGEANYQDLTLKQSVTLLDSLRFCWREDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLTARKSHSTSTSTGREWAASAVIDDFILVIHDIRCLEEHVRGDYLQHVVQVLSSCSFDVLESVRQSILQSGQSLKSLEPLVVKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVTGVLRPLKTFLDGERTSRYLASETKKEILLCAATEITDRYYELAADLVSVARKTESSLQKIRQSAQRRAGASSDISDNNVSDTDKMCMQLFLDIQEYARNLSALGVEAVNIPSYRSLWQCVAPADKQNTIKL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02283 753 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Vivi1g02283 753 Pfam COG complex component, COG2, C-terminal 587 715 IPR024603 -
Vivi1g02283 753 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 11 750 IPR009316 GO:0007030|GO:0015031|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02283 K20289 - gmx:100817096 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02283 1 48202864 48215287 Vivi1g02283 1 48202864 48215287 ECH