Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02254 ATGTTGCCTCCACCGATCGTCTTCGATCTTAACGATGTGAAACAAAAACTCTCCCTTCAGTTTCGCCCTTTGCAACGTTCTTTCCAGTTCTGGGTTCGAGCCATTGATATTTACACCGGATACAAGGTGTTTCAATTGAGAGTGAATTTCGAGAAGGATGTGCTGAAGCAAGAAGCAATGTGGGAAAGACAGCACGAGCTTGCGGCGGATAAGATTTTCTCTATGTGCTCTGACCTTGGTGGTTTCTTCCTCAAGATTGCGCAAATTATAGGGAAACCGGATTTGGCGCCTGCTGCATGGGTGAAAAGGCTTGTTACGCTCTGTGATCACGCTCCTGCAACCTCTTTTCATACTGTTAAACTTGTGCTAGAGAATGAGTTGGGACAGGGTATTGATGAGGTGTTTGATAGGTTTGATATTGAGCCTCTTGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCGAGACTGAAAGGTGACAAAGGTGATGTAGTTGTCAAGGTTCAGCATCCTGGAGTTCAGGATCTGATGATGACAGATATCCGTAACTTGCAAGCTTTTGCTTTGTACATGCAAAAGACAGATATCAAATTTGATCTATATTCTGTTACAAGAGAAATGGAAAAACAGATTGGCTATGAATTTGACTTCATGAGGGAGGCCAGTGCAATGGAAAGGATTAGAAAGTTCTTGTATAAAGTTAACAGAAGGACTCCTGTTTTGGTGCCAAGAGTAATACGAGATATGGTAACTAGAAGGGTCCTAGTTATGGAATATATCGACGGGGTTCCAATAATGAACCTCGGTGATGAAATAGCAAAGAGAGGCATAAATCCTCACGGTAAGGTTGCAGCTGCCGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGGTTCTTCCACGCAGATCCCCATCCAGGAAATATCCTTATTTGTAAAGGGTCAGAGGTTGCCTTGCTAGATTATGGACAGGTGAAGGATCTCCCAGAGCAGTTGAGGCTTGGTTATGCTAATCTCGTTCTTGCAATTGCTGATGGTGACTCAGTAAGAGCTTCCGCGAGCTTTAGGGAGCTTGGTATAGATACATTAAGCAAATGTGAAAATGAGCAACAAGAAATGTTTAAACTGGCACAGACAATGTTCGATACAAAATTACCTCCTGGTGTGAAAATGCTGCAACCCTTTTCAGATGAATCTTCAATTAAAAAAATAGCTGTTCAGGCTTTCCCAGAAGAACTGTTTTCTATACTTCGGACAGTGCATCTACTGAGGGGACTAAGTGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGACCCATTGCTGAAGAAGCTTTGTCTCAAGCTGGTAGATTTAAAGATAAAAATCTTCAGCAAAGAGGTAGATTACATGGTATATTAAAAACATTATTTTGGAGAGACTAA 1455 0.4158 MLPPPIVFDLNDVKQKLSLQFRPLQRSFQFWVRAIDIYTGYKVFQLRVNFEKDVLKQEAMWERQHELAADKIFSMCSDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDHAPATSFHTVKLVLENELGQGIDEVFDRFDIEPLGSASIAQVHRARLKGDKGDVVVKVQHPGVQDLMMTDIRNLQAFALYMQKTDIKFDLYSVTREMEKQIGYEFDFMREASAMERIRKFLYKVNRRTPVLVPRVIRDMVTRRVLVMEYIDGVPIMNLGDEIAKRGINPHGKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLAIADGDSVRASASFRELGIDTLSKCENEQQEMFKLAQTMFDTKLPPGVKMLQPFSDESSIKKIAVQAFPEELFSILRTVHLLRGLSVGLGINYSCAEQWRPIAEEALSQAGRFKDKNLQQRGRLHGILKTLFWRD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02254 484 SUPERFAMILY Protein kinase-like (PK-like) 114 332 IPR011009 -
Vivi1g02254 484 SMART serkin_6 137 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02254 484 ProSiteProfiles Protein kinase domain profile. 137 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02254 484 CDD ABC1_ADCK3-like 107 363 - -
Vivi1g02254 484 PANTHER ABC1 FAMILY PROTEIN 26 457 - -
Vivi1g02254 484 Gene3D Transferase(Phosphotransferase) domain 1 133 346 - -
Vivi1g02254 484 Pfam ABC1 atypical kinase-like domain 107 357 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02254 Vivi-Chr1 47489452 47497658 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02254 K08869 - gmx:100813009 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02254 1 47489452 47497658 Vivi1g02254 1 47489452 47497658 ECH