Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02180 ATGACAAGCTCTACTTTACTTGCAATTCTCAAACTCTTGATTATTTTCATATGTGCAGTTTGGATTTCTCTCTGGATTCTGAAGCCAACTCAAGCATGGACAAGAATATGGAAACATGCAGAACAAAGTGCCAATAATACAATTTTTGGATACTATGGTCTAAACTTTGCTGTGTATACATTTCCTATAATTGCTATTGCAATAATTGGACTTCTTTTCTTGGATTTGAAAGCTGGATATCAAAGAACCAGAAGTGCAAGGAGTCCATCAACTGTGTTCTCGAATCCACTTGTGGTGAATAGTCTATTCGGAATCTTAACCAGTATTGAAATACTGGTAGTTATCCTTGTTATAGTCTTCTTGGGATGGACTTATTACGCTCGAATTTCTAAGGATTTCAAAAAGTTGATGCAAGACAAATCACTGAAATTGAACCTATGGCAACTCAAGTATCTCAGAATAGCGACAAGGTTTGGATTGTTAGCAGAAGCTTGTTTAGCTTTGCTTCTTCTTCCGATTTTAAGAGGCTTGTCTCTATTTCGCATATTTGGTATTCAATTCGAAGCATCGGTTAAGTATCATACATGGATTGGAACAGCAATGATACTTTTTGCTACAATACATGGTGCCAGCACTTTGTTTGTTTGGGGTGTAAGCCACCATATCCAAGATGAGATTTGGAAGTGGCAAAAGACCGGACGTATATACCTAGCCGGGGAGATCGCACTTGTTATCGGGCTAGTTATCTTCGTTACTTCACTTCCTCAAATTAGAAGAAGAAAGTTTGAGATTTTCTATTACACACATCACTTGTATATACTCTTTCTAGTATTTTTCTTGTTTCATGCCGGAGATAAGCACTTTTACATGGTCTTTCCAGGAGTATTTCTTTTTAGCCTTGATAAACTGCTCCGTATAATTCAATCAAGCCCGAAAACTTTCATAGTTTCGGCTAGAATTTTTCCCTGTGAAGCTCTGGAGTTAATTCTTCCCAAAGATCCGAGGCTAAAGTATAACCCTACAAGTGTTGTATATATGAAGATACCAACTATATCGCGTCTTCAATGGCACTCATTCAGTATAATATCGAGTTCCAAAGCCGACGAAAACACTATGTCTGTGGTGATTAAATGTCAAGGGTGGTGGACTAATACTCTTTATGATTTGATACAAACTGAACTAAACAAAGGTGAAGATAAAAGAAATGGTATACCTGTTGCAATTGAAGGACCCTATGGACCTGCTTCATTAGAATTTTTAAAACATGACAGTGTACTTATGGTTGCCGGAGGAAGTGGAATAACACCATTTCTGAGTGTTTTGGCCGAGATTGCTTCTACCACCAACAAAAATAAATTTCCTTCAAAGATCCAACTTGTACATGTCATAAAGAGGGCACAAGATGTTTGTTTGTTACATTCGATCATGCATTTGCTACTCAACCAAGCAAGCAGAAAGTTTCATTTGAAACTGAAATTGTTTGTTACACAAGAAACGCAGCTAGACATGGGAATTACGGAGCTGCTAAATGACTTCGTGAAAGTGAAAACCATGAAATTGGACAGTGTGAACTCAAAATATTATGCAGCATATGGACTTGAGAGTCCAGTTTGGATGGCTGCTATCACTGGATTTTGTTCCATCACTTTCCTTATTTTTCTAATTTGTTTCAACCATACTATAATTCCACACAGGAAAAAGTCCAAGGAAAAAACTTCGTCTTGGATTGTGGATTTACTTCTGATAGCTGCTTTTGTCGTAGCTTTATCTTGCAGCGCATTGATAGCAATTGTGTTGAGATGGAGAAGGTTGAAGAAAGGGATTCCGCCAACGTCGCGGAAGGAAATCAAACCCTTTGATCTAAGTTCAGCTGAAAGTAAAAATGATCTTGAAGAACATGAAGTTCATTTCGGAGGAAGGCCTAACTTTAAAGATATATTAGGCAAGTTCAAGAATGAAACGTGTGGATCTAATGTTGGAGTTTTGGTTTGTGGACCTGAAAGCATGAAGGAATCAGTGGCGGCTGCGTGTCAGCAGGAATTTGAGTGCTTGAAGTTAGGTGTAAAGAAAGCAGAACCATGCTTCACTTTACACTCTCTCAACTTCACTCTTTAG 2115 0.3801 MTSSTLLAILKLLIIFICAVWISLWILKPTQAWTRIWKHAEQSANNTIFGYYGLNFAVYTFPIIAIAIIGLLFLDLKAGYQRTRSARSPSTVFSNPLVVNSLFGILTSIEILVVILVIVFLGWTYYARISKDFKKLMQDKSLKLNLWQLKYLRIATRFGLLAEACLALLLLPILRGLSLFRIFGIQFEASVKYHTWIGTAMILFATIHGASTLFVWGVSHHIQDEIWKWQKTGRIYLAGEIALVIGLVIFVTSLPQIRRRKFEIFYYTHHLYILFLVFFLFHAGDKHFYMVFPGVFLFSLDKLLRIIQSSPKTFIVSARIFPCEALELILPKDPRLKYNPTSVVYMKIPTISRLQWHSFSIISSSKADENTMSVVIKCQGWWTNTLYDLIQTELNKGEDKRNGIPVAIEGPYGPASLEFLKHDSVLMVAGGSGITPFLSVLAEIASTTNKNKFPSKIQLVHVIKRAQDVCLLHSIMHLLLNQASRKFHLKLKLFVTQETQLDMGITELLNDFVKVKTMKLDSVNSKYYAAYGLESPVWMAAITGFCSITFLIFLICFNHTIIPHRKKSKEKTSSWIVDLLLIAAFVVALSCSALIAIVLRWRRLKKGIPPTSRKEIKPFDLSSAESKNDLEEHEVHFGGRPNFKDILGKFKNETCGSNVGVLVCGPESMKESVAAACQQEFECLKLGVKKAEPCFTLHSLNFTL 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02180 704 CDD NOX_Duox_like_FAD_NADP 315 497 - -
Vivi1g02180 704 Gene3D - 406 539 IPR039261 -
Vivi1g02180 704 Gene3D - 587 702 IPR039261 -
Vivi1g02180 704 FunFam ferric reduction oxidase 8, mitochondrial 406 542 - -
Vivi1g02180 704 PANTHER NADPH OXIDASE 32 702 - -
Vivi1g02180 704 Pfam Ferric reductase like transmembrane component 159 279 IPR013130 -
Vivi1g02180 704 Pfam Ferric reductase NAD binding domain 422 678 IPR013121 GO:0016491
Vivi1g02180 704 Pfam FAD-binding domain 316 416 IPR013112 GO:0016491
Vivi1g02180 704 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 293 418 IPR017927 GO:0016491
Vivi1g02180 704 SFLD Ferric reductase subgroup (FRE) 5 697 - -
Vivi1g02180 704 PRINTS Cytochrome B-245 heavy chain signature 262 282 IPR000778 GO:0016020|GO:0016491
Vivi1g02180 704 PRINTS Cytochrome B-245 heavy chain signature 237 260 IPR000778 GO:0016020|GO:0016491
Vivi1g02180 704 SFLD Ferric Reductase Domain 29 685 - -
Vivi1g02180 704 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 406 511 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02180 Vivi-Chr1 45829801 45832934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02180 179 704 Miscellaneous Gene Families AT5G50160 46.920 1.18e-174 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02180 K00521 - gmx:100816560 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02180 1 45829801 45832934 Vivi1g02180 1 45829801 45832934 ECH