Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02130 ATGGAAAAATCATGGATTGCGGCGATGTATTTGGTCCTGGCTACGATTTGCAGCACAACTGCTACTAACGAATCGCCACCATACACCGTCGTTCACACCGCGTCCGATTTCGAGATCAGACTCTACCAAACATCCGTCTGGATGTCCGCCCCCGCCCTAAACATCATCTCCTTCGAGAAAGCCACATGGAACGGCTTCCACAGACTGTTCCAGTTCATACAAGGCGCCAATCTCAATTTCTCTCGAATTCCAATGACCGCTCCAGTATTAACAACCATGGTACCCGGTGCCGGTCCTCTCGAATCACAAGGCTACTATATTAGTTTCTATTTGCCGCTGAAATTCCAAGCGGATCCACCGCTTCCACTTCCGGAACTCAATATCAAACCCTATAAGTTTGATAGCCACTGCGTTGCTGTGAGAAGATTCTCTGGATTTGCGAAGGATGAGAGGATTGTTAAAGAGGCGGAGAAGCTGGATTCGAGTTTGAGTAGGTCGCCATGGGGGGAGTTGAAGAGTCAGCGCGGTTACTCGATTGCGCAGTATAATTCTCCTTTAAGGATTGCTAAACGGAGGAATGAGGTTTGGGCGGATGTTCATGCTCCTGAATTGGGATGTAACTTAGTTGGTGTTGCAGCATTTTGA 645 0.4822 MEKSWIAAMYLVLATICSTTATNESPPYTVVHTASDFEIRLYQTSVWMSAPALNIISFEKATWNGFHRLFQFIQGANLNFSRIPMTAPVLTTMVPGAGPLESQGYYISFYLPLKFQADPPLPLPELNIKPYKFDSHCVAVRRFSGFAKDERIVKEAEKLDSSLSRSPWGELKSQRGYSIAQYNSPLRIAKRRNEVWADVHAPELGCNLVGVAAF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02130 214 Gene3D Regulatory factor, effector binding domain 23 204 IPR011256 -
Vivi1g02130 214 FunFam Heme-binding protein 2 23 204 - -
Vivi1g02130 214 SUPERFAMILY Probable bacterial effector-binding domain 16 198 IPR011256 -
Vivi1g02130 214 PANTHER HEME-BINDING PROTEIN-RELATED 18 198 IPR006917 -
Vivi1g02130 214 Pfam SOUL heme-binding protein 24 197 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02130 Vivi-Chr1 45010086 45010971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02130 - - gmx:100306073 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02130 1 45010086 45010971 Vivi1g02130 1 45010086 45010971 ECH