Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02108 ATGCGATCCACTCGTACCACTCCCACCTTCACCGTATTCGCTCTCTTCATCATCGTGATCTTTCCCCATGTCACTATTCAGGGACACTCATTCTCACCATTTGCATCATCCCTCGAAACCCTCCAAAAACAACTAGGGTACACTTTCAAGACCATAAGTCTTCTCCGTCGTGCTATGACTCACGCTTCCTTCTCCGAAGAGAACAACAAAGCTTTCAGCATTTTTGGTGCTACTATCATAGAAACCTCGGTTTCTTTCAATTTGCTTTCCAAAGACGTTGATGTTTCTGCCAAAGAGATGAACCGTCGATTATCGTTGATCTCCAATGTGGACTCTTCTTGTGCCGTTGATGGAGTGCGTTTGGGGTTGCATAAGGTGGTTCGTGTTTCGCCCAAGACTAATTCTTCTTCCACTGCTGTGGTTTGTGGTGCTTTCCGATCGATATTCGCTGCTATTGCTCTTGATACTGGTAATTCGGATACTGCCGGTAATGTTTTCTTGACTGTTCATGGTCGTGATCTCGGGTTTTCTATGGATATGTGA 543 0.4512 MRSTRTTPTFTVFALFIIVIFPHVTIQGHSFSPFASSLETLQKQLGYTFKTISLLRRAMTHASFSEENNKAFSIFGATIIETSVSFNLLSKDVDVSAKEMNRRLSLISNVDSSCAVDGVRLGLHKVVRVSPKTNSSSTAVVCGAFRSIFAAIALDTGNSDTAGNVFLTVHGRDLGFSMDM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02108 180 SMART riboneu5 53 179 IPR000999 GO:0004525|GO:0006396
Vivi1g02108 180 SUPERFAMILY RNase III domain-like 37 166 IPR036389 GO:0004525|GO:0006396
Vivi1g02108 180 Gene3D Ribonuclease III domain 36 174 IPR036389 GO:0004525|GO:0006396
Vivi1g02108 180 Pfam Ribonuclease-III-like 53 160 IPR000999 GO:0004525|GO:0006396
Vivi1g02108 180 ProSiteProfiles Ribonuclease III family domain profile. 38 157 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02108 - - aprc:113847954 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02108 1 44586544 44587445 Vivi1g02108 1 44586544 44587445 ECH