Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02090 ATGGCATTACGTAACCTTTTTGTGCTGGGTTTGTTGCTTCTAGTTTGCCTCTCTAATCTGATGCAGGTTTCATCTGATCATGAGATAGAAATGGAAGAAGAAGATGAAGAACTGCTGCTACCTAATGAGTTGCTTACTGTGCGAGACGGCAACAGAAAGCTAATGCAAGACATAGATTGTGGAGGATTGTGCAGTTCGAGATGCAGTGTACATTCAAGGCCAAACTTGTGTAACAGAGCATGTGGAACTTGTTGTGTGAGGTGCAAGTGTGTTCCACCTGGTACTTCTGGTAATAGGGAGCTTTGTGGGGCTTGTTACACTGATATGACTACCCATGGCAACAAGACCAAGTGTCCTTAG 360 0.4417 MALRNLFVLGLLLLVCLSNLMQVSSDHEIEMEEEDEELLLPNELLTVRDGNRKLMQDIDCGGLCSSRCSVHSRPNLCNRACGTCCVRCKCVPPGTSGNRELCGACYTDMTTHGNKTKCP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02090 119 Coils Coil 17 37 - -
Vivi1g02090 119 Pfam Gibberellin regulated protein 59 119 IPR003854 -
Vivi1g02090 119 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 6 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02090 Vivi-Chr1 44280206 44280966 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02090 - - psat:127073889 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02090 1 44280206 44280966 Vivi1g02090 1 44280206 44280966 ECH