Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02084 ATGGCACTACTTTTCAACTTACAGTTTTCTCGTTGGACTTTCTACAAACACCTTACGCCGCGTAAATATACAACGCTCTGTCAGCATAATTCCACAACCAATTTATCCCATTTCGCAACCCTAACTTCCCGCCAGAAAGACCAGATTCATCTCTACGTCGATACACTTCTTCAATGGAACAAGCGTATGAATCTAACCGCAGTTAAAGAAGTGAATGAAGTCATGGAAAGACACATTGAGGACTCCCTCGCGATTTTGCCTCCGTTGAGGGATAATTATATCAGTCACTGCAGCAATTCCGTCGAGAAGGTTAAACTCGTCGATGTTGGAACTGGCGCAGGCCTTCCTGGAGTAGTTTTGGCTATTGCTCGACCAGATTGGGATGTAACGCTGATGGAGTCTTTGAACAAGCGGTGCGTCTTCTTGGAGCACGTTGTTGGTGTTATTGGTACCTCCAATGTTCAAATTGTAAGAGGAAGAGCCGAGAGTTTGGGACAGGATCTTTTCTTCAGAGAGAAATTTGACATCGCAGTAGCCAGGGCAGTTGCAGAGACGAGAATATTAGCTGAGTATTGTCTTCCGTTCGTTCGTGTTGGGGGGATGTTTATTGCTGCCAAGGGTCATGATCCTGAGGAAGAAGTTAAGAAAGCTGAAAGCGCCATCAAGAAAATGGGTGCGTCATTATTGCAAGTATGCTCAGTGGAATCGCAAAGCCCATATGGTCAGCGTACTGCCGTCATATGTCTGAAGGATCGGCCTACTCCAATGAAATATCCCCGAGCTCCTGGTACACCAACCAAAGAACCATTGTAA 813 0.4563 MALLFNLQFSRWTFYKHLTPRKYTTLCQHNSTTNLSHFATLTSRQKDQIHLYVDTLLQWNKRMNLTAVKEVNEVMERHIEDSLAILPPLRDNYISHCSNSVEKVKLVDVGTGAGLPGVVLAIARPDWDVTLMESLNKRCVFLEHVVGVIGTSNVQIVRGRAESLGQDLFFREKFDIAVARAVAETRILAEYCLPFVRVGGMFIAAKGHDPEEEVKKAESAIKKMGASLLQVCSVESQSPYGQRTAVICLKDRPTPMKYPRAPGTPTKEPL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02084 270 NCBIfam 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 51 242 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vivi1g02084 270 FunFam Ribosomal RNA small subunit methyltransferase G 25 270 - -
Vivi1g02084 270 CDD AdoMet_MTases 105 184 - -
Vivi1g02084 270 Gene3D Vaccinia Virus protein VP39 20 270 IPR029063 -
Vivi1g02084 270 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 38 247 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vivi1g02084 270 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 3 270 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vivi1g02084 270 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 270 IPR029063 -
Vivi1g02084 270 Pfam rRNA small subunit methyltransferase G 46 235 IPR003682 GO:0005737|GO:0006364|GO:0008649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02084 K03501 - gmx:100818428 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02084 1 44140610 44144222 Vivi1g02084 1 44140610 44144222 ECH