Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02069 ATGGTTTCTGATTCAATCTCTGCTGCTCCGATTCCTTCCGCCGCAAACACCAAGAACCCAGGCAAGAAGAAGAGGACCAACAGGTCTGCGAAATTGAAGCAGTATAAGATTGATGCGCGTCGCGAACAATGGTTATCTCAAGGTGCTGCAAAGAATAAGGGGTGTAAGGATGGAATGGATGATGATATCCACCTGCCTTCGTCGCCTATGGGTAAACGTGGAAAACAGGAATTGGAGAAAGTGGAGACGAGGCGGAGAGGTGAAGAGGATGGGATCCATCAAGACAGTGATTCGGAAACGCCGTCGAACAGTCCTATCAGTCCAAATTGTAGTGTCTTATGTGGTGGTACTGATTCTGGGACAAATTTCACGGGTAGCAGCAGCAGCGGTAGAAGCAGCAGTAGTAGTTCTAGCAGTGGTGGGTGTTTCTCTGGGAATGTTACGGAAGAGGAAGAGGATAATAATGATGAAGAGGTAGAAGAAGAAGATGATGGATGCTTGGATGATTGGGAGGCTGTGGCAGATGCTTTAGCCGCTGATGACAAGCACGAAACCTCTTCACACGATGAACCCGTTGTGGAAACGGATTTATCACGTGAATTGACTCGTGGTGCAAGTTTAGGATACCCAAATTCCAAACTATGTAGTGCTGGGATGGTTCCTTGGGGCTCTGGCAATGCTAGAGCTTGGAGGGTGGATGATGCTCTTCGTCCGCAGACATTGCCCAATCTTTCAAAACAGCATAGTATGCCGAATCCAGACCGGTGTTTTGGAGGAGGGGTTCCCTGGTCTCGCACCTCTGTGCCATCCCCTTGTCCAATTTGTTGTGAGGATCTTGATCTAACGGACACAAGTTTTCTTCCGTGCAATTGTGGTTTTCGGCTTTGTCTCTTTTGCCACAAGAGGATTCTTGAGCAGGATGCTCGTTGTCCCGGGTGCAGGAAGCAATATGAGTGTGAACCTATTGAGACAGAGGCAAGTGTGCATGGAGGTAGCCTTACTCTTCGGTTGGCTCGATCTGTTAGCATGATCGAAAGGTCTTGA 1044 0.4847 MVSDSISAAPIPSAANTKNPGKKKRTNRSAKLKQYKIDARREQWLSQGAAKNKGCKDGMDDDIHLPSSPMGKRGKQELEKVETRRRGEEDGIHQDSDSETPSNSPISPNCSVLCGGTDSGTNFTGSSSSGRSSSSSSSSGGCFSGNVTEEEEDNNDEEVEEEDDGCLDDWEAVADALAADDKHETSSHDEPVVETDLSRELTRGASLGYPNSKLCSAGMVPWGSGNARAWRVDDALRPQTLPNLSKQHSMPNPDRCFGGGVPWSRTSVPSPCPICCEDLDLTDTSFLPCNCGFRLCLFCHKRILEQDARCPGCRKQYECEPIETEASVHGGSLTLRLARSVSMIERS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02069 347 MobiDBLite consensus disorder prediction 1 165 - -
Vivi1g02069 347 MobiDBLite consensus disorder prediction 97 145 - -
Vivi1g02069 347 FunFam RING/U-box superfamily protein 265 330 - -
Vivi1g02069 347 CDD mRING-HC-C4C4_CNOT4 272 315 IPR039515 -
Vivi1g02069 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 329 IPR013083 -
Vivi1g02069 347 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 268 340 IPR039780 GO:0004842|GO:0030014
Vivi1g02069 347 ProSiteProfiles Zinc finger RING-type profile. 272 314 IPR001841 -
Vivi1g02069 347 MobiDBLite consensus disorder prediction 54 96 - -
Vivi1g02069 347 Pfam RING/Ubox like zinc-binding domain 272 318 - -
Vivi1g02069 347 SUPERFAMILY RING/U-box 270 323 - -
Vivi1g02069 347 MobiDBLite consensus disorder prediction 149 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02069 Vivi-Chr1 43873076 43874735 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02069 - - vvo:131635821 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02069 1 43873076 43874735 Vivi1g02069 1 43873076 43874735 ECH