Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02017 ATGGGGAATCTTTTGTGTTGCGTGCAAGTTGACCAGTCTACGGTGGCTATGAAAGAAGGTTTTGGAAAATTTGAAAAGGTGCTTCAGCCGGGATGCCATTGCCTGCCATGGATCCTTGGAAAGCGAATTGCTGGTCATCTGTCTCTTCGGCTGCAACAATTGGATATCAAATGCGAGACCAAGACAAAGGATAATGTCTTTGTGAATGTTGTTGCTTCGATTCAATACCGTGCCTTGGCTAACAGTGCTAATGACGCATTTTACAAACTTAGCAACACAAGGTCCCAAATCCAAGCTTATGTTTTTGATGTAATTAGGGCGAGTGTTCCAAAGCTCAACTTAGATGATGCTTTTGAGCAGAAAAATGAAATCGCAAAAGCTGTGGAAGAAGAACTTGAGAAGGCTATGTCAGCTTATGGATATGAAATCGTTCAAACACTGATTACTGACATAGAGCCAGATGAGCATGTGAAGCGAGCTATGAATGAAATCAATGCTGCTCAAAGATTGAGGATGGCAGCAAATGAGAAGGCAGAGGCAGAGAAAATCTTGCAAATCAAGCGAGCTGAGGGTGAGGCTGAGTCCAAATACCTCAATGGAATGGGTATTGCTCGCCAACGTCAAGCCATTGTGGATGGTCTCAGAGACAGTGTGATTGGATTTTCGGTTAATGTACCAGGGACAACAGCAAAAGATGTCATGGATATGGTTCTTATCACTCAATACTTTGACACAATGAAAGAAATTGGGGCTACCTCCAAGACCTCTGCTGTGTTCATTCCACATGGACCTGGTGTTGTTCGCGATGTAGCTAGCCAAATCCGTGATGGACTTCTCCAAGGTTCTGTAGCTCATGTGTAG 861 0.4379 MGNLLCCVQVDQSTVAMKEGFGKFEKVLQPGCHCLPWILGKRIAGHLSLRLQQLDIKCETKTKDNVFVNVVASIQYRALANSANDAFYKLSNTRSQIQAYVFDVIRASVPKLNLDDAFEQKNEIAKAVEEELEKAMSAYGYEIVQTLITDIEPDEHVKRAMNEINAAQRLRMAANEKAEAEKILQIKRAEGEAESKYLNGMGIARQRQAIVDGLRDSVIGFSVNVPGTTAKDVMDMVLITQYFDTMKEIGATSKTSAVFIPHGPGVVRDVASQIRDGLLQGSVAHV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02017 286 SMART PHB_4 5 165 IPR001107 -
Vivi1g02017 286 FunFam Hypersensitive-induced response protein 1 41 167 - -
Vivi1g02017 286 Coils Coil 157 190 - -
Vivi1g02017 286 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 5 282 - -
Vivi1g02017 286 CDD SPFH_like_u4 10 278 - -
Vivi1g02017 286 SUPERFAMILY Band 7/SPFH domain 46 171 IPR036013 -
Vivi1g02017 286 Gene3D Band 7 domain 42 167 IPR036013 -
Vivi1g02017 286 Coils Coil 114 138 - -
Vivi1g02017 286 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02017 Vivi-Chr1 42470906 42473533 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02017 - - qsa:O6P43_022801 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02017 1 42470906 42473533 Vivi1g02017 1 42470906 42473533 ECH