Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02015 ATGAGCAAGGGTCCTGGTGTATATTCAAGTATTGGTGATAAAGCCAAAGATGTTCTTTACAAGGACTATGCTCAACAATCGCCGATTCACTTTCACTACAAATTCATGGATTGGAATGCAGGCTTTGCTTGTAAAGTTATAGAAATTGTACCTGGATTCCGGACAGTTTTCAAATGTACCATACCAGATTCCGGGAAGGTAGAACTACAGTATGTGAATAGATTCACTGGGATTAGTGGATGCATTGGATTATTAGGAAGCGAAGAAGGACAATACGAACCTGTTTTAAACTTCTCCGGCCTTCTAGGAACAAGCATTCTGTCCCTGGGAGCCAATGTTGCATTCCACATACCAACAAGATCGATAACCAAGCTCAATGCTGGTTTCGGCTTCAACAGTGCCTTCCTCGAAGCTTCATTGACCTTGCATGACAGCTTCGACACACTAAAAGCGACGTTTTATCATCAAGTAAATCCCCTAACCCAGACGGCCATTGCAACACAGGTGAAGCATAGCTTGTCACTCAAGGAAACTGGTGTCAACATTGGTGTTCAGCATGCATTTTTTCCGGAAACGCTGTTTAAGGCTCGATTTGACAGCTCTGGCAAGGCAGGTACTCTCATTCAACAAGGGTTTTGGCAGAAGTTTTTTGTAACTATGGCTGGTGAAATTGATTTCGGGGCCGAAGATAAGACTCCGAAGTTCGGAGTTTCTATGGCTCTGAGACCCTAG 732 0.4372 MSKGPGVYSSIGDKAKDVLYKDYAQQSPIHFHYKFMDWNAGFACKVIEIVPGFRTVFKCTIPDSGKVELQYVNRFTGISGCIGLLGSEEGQYEPVLNFSGLLGTSILSLGANVAFHIPTRSITKLNAGFGFNSAFLEASLTLHDSFDTLKATFYHQVNPLTQTAIATQVKHSLSLKETGVNIGVQHAFFPETLFKARFDSSGKAGTLIQQGFWQKFFVTMAGEIDFGAEDKTPKFGVSMALRP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02015 243 Pfam Eukaryotic porin 49 236 IPR027246 GO:0005741|GO:0055085
Vivi1g02015 243 Gene3D Porin 3 242 IPR023614 -
Vivi1g02015 243 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 26 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02015 Vivi-Chr1 42469042 42470864 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02015 K15040 - gmx:100787061 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g00185 6 4701520 4705124 Vivi1g02015 1 42469042 42470864 ECH
Vivi1g02015 1 42469042 42470864 Vivi1g02015 1 42469042 42470864 ECH