Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02014 ATGAACTCAATGACGACGCCGTTTCAACATGGGCCGCCGCAAACGGTGAGGAGATTGGTGGTGGAAGTTGTGGACGCGCGCAACCTGCTACCCAAAGATGGTCAAGGAAGTTCAAGCCCTTATGTTGTGGGGGACTTCGATGGTCAGAGAAAACGAACCACCACCAGGTTCAAGGAGCTGAACCCAGTTTGGAACGAAACCCTTGAGTTTATTGTTTCAGACCCGGAGAATATGGAGTTTGAGGAGCTTGAAGTTGAGGTTTACAATGATAAAAAGTTTGGAAATGGTAGTGGACGGAAGAATCATTTTCTGGGTAGGGTTAAGCTTTATGGAACGCAGTTTTCAGGTAGAGGAGAAGAGGCTCTGGTTTACTATACGCTAGAGAAGAAGAGTGTTTTCAGTTGGATAAGAGGTGAAATCGGTCTCAAGATTTATTACTACGATGAACTGTTGCAGCAACAAGAGCAGCAACAACAACAGCAACAGGAGCAGCCACCACCACAGGAGGAGGAGAGACCTTCCGGAATGGAGCAAGAGAGAAACAGACCTCAGATGATGGTTGAGGAGGGAAGGGTTTTTCAGGTTAATGGTAATGGACCGATGGAGCATTGTGTTCCACTTCCAGATGGTCCTCCTTCGCCGCGTGTTGTGGTTGTTGAGGAATCACCATCTCCGGTTGTTCGTGTTCAACAGGATCCACCTTTGCCGGAGATGTATGGTCATCCGGAACCGGAAATGCAGTATCACCAGCCGGAAGTGAGAAAAATGCAAGCAATAAGAAATGATAGAGTGAAGATTATGAAGAGACCAAACGGCGACTACGCGCCGAAAGATATCTCCGGCAAGAAACCAAACGGTGAGTCTGAGAGGATTCATCCCTATGATCTAGTGGAGCCAATGCAGTATCTGTTTGTCAGAATCGTCAAGGTTCGTGGTCTTAATCCTCCAACTGAAAGCCCATTCGTGAAGGTTCGAACCTCCAGTCACTACGTGAGATCAAAGCCTGCAAGTTATCGTCCGAACGAGCCAAACGACTCACCGGAGTGGAACCAGGTTTTTGCCCTAGGTTACAACAAGACCGACGCAGCTAGTGCCACGTTAGAGATTTCAGTTTGGGATTCACCTACAGAGCAATTTCTCGGTGGCGTTTGCTTTGATCTTTCTGATGTACCTATCCGAGACTCTCCTGATAGTCCTCTTGCTCCACAATGGTACCGTCTCGAAGGAGGTGCCGCCGAACAAAACACTGGCAGAGTCTCCGGTGATGTTCAGTTATCCGTTTGGATCGGAACTCAATCTGACGATGCATTTCCAGAAGCATGGAGCTCAGATGCACCGTACGTGGCACACACTCGCTCCAAGGTTTACCAATCACCTAAGCTATGGTACCTTCGTGTTACAGTAATGGAAGCACAAGACCTGAATCTGACTCCAAATCTACCTCCATTAACAACACCGGAGATCAGAGTTAAGGTGCAATTAGGGTTTCAATCACAGAGAACGAGACGAGGCTCAATGAACCACCACAGCATGTCGTTTCACTGGCACGAAGACCTTCTCTTCGTCGCCGGTGAGCCTCTAGAAGATTCCATGGTTCTTCTGGTGGAGGATCGAACCACCAAGGAAGCGGCACTCCTCGGCCACGTGGTGATTCCTCTTACTTCAATTGAACAGCGAATAGATGACCGCCACGTGCCAGCCAAATGGTTCCCACTGGAAGGTGGATCCTACTGCGGACGAGTCCACCTCCGCCTCAACCTCGAAGGTGGATATCACGTGCTTGACGAAGCGGCGCACGTGTGCAGCGATTTCCGTCCCACAGCAAAATCTCTCTGGAAACCTCCCGTTGGGATTCTTGAACTTGGAATCCTAGGCGCTCGTGGTCTTCTCCCAATGAAATCCAAGGGTCCAGGAAAAGGGTCCACGGATGCTTACTGTGTAGCCAAGTATGGGAAAAAATGGGTCCGAACCCGTACCGTAACGGATAGCTTCGACCCACGCTGGAACGAACAGTATACATGGCAGGTTTATGACCCATGCACCGTTTTGACCGTTGGTGTTTTTGACAACTGGCGTATGTTTGCTGACGCGTCAGAAGAAAAACCTGATTGCCGTATCGGAAAAGTTCGTATTCGGGTTTCCACTCTAGAAAGCAACAAAATCTACACAAGTTCATATCCATTACTGGTTCTAACTCGAACCGGTTTAAAGAAAATGGGTGAAATCGAATTAGCGGTTCGGTTCGCATGCCCTTCGTTTCTTCCCGACATGTGTGCAGTTTACGGCCAACCATTACTTCCAAAAATGCACTACATCCGCCCCCTAGGGGTAGCTCAACAGGAAGCTCTCCGTGGCGCTGCCACCAAAATGGTGGCTCAGTGGCTGGCACGGTCTGAGCCACCAATGGGACACGAGGTTGTTCGTTACATGTTGGACGCTGACTCACACGCTTGGAGCATGAGGAAAAGTAAAGCGAATTGGTTTAGAATTGTGGCAGTCTTAGCCTGGGCCGTTGGATTAGCTAAATGGTTAGATGATATCAGAAGATGGAAAAATCCAGTTACAACGGTTTTGCTTCATATACTCTACTTAGTACTTGTTTGGTATCCAGATTTAATTGTTCCAACCGGGTTTTTATACGTGGTTTTAATTGGGATATGGTATTACCGTTTTAGACCCAAAATACCTGCTGGTATGGATACACGATTATCACAATCCGAAGCTGTTGATCCGGATGAACTAGACGAAGAATTTGACACCATGCCTAGCTCCAAACCACCTGATATGGTTCGGATTCGTTATGACAGGTTAAGGATGTTGGCTGCGAGGGTGCAAACGGTTTTAGGTGATTTTGCAACACAAGGGGAAAGGGTTCAAGCATTGGTTAGTTGGAGGGACCCAAGAGCTACCAAATTGTTCATTGGAGTGTGTTTTGTTATTGCTATTATACTCTATTCTGTGCCTCCTAAAATGGTTGCTGTGGCTTTGGGATTCTATTACCTCCGTCATCCGATGTTTCGGAACCCAATGCCGCCGGCTAGTTTGAACTTTTTCCGGCGACTTCCTAGCTTGTCTGATCGGTTGATGTAG 3090 0.4799 MNSMTTPFQHGPPQTVRRLVVEVVDARNLLPKDGQGSSSPYVVGDFDGQRKRTTTRFKELNPVWNETLEFIVSDPENMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSGRGEEALVYYTLEKKSVFSWIRGEIGLKIYYYDELLQQQEQQQQQQQEQPPPQEEERPSGMEQERNRPQMMVEEGRVFQVNGNGPMEHCVPLPDGPPSPRVVVVEESPSPVVRVQQDPPLPEMYGHPEPEMQYHQPEVRKMQAIRNDRVKIMKRPNGDYAPKDISGKKPNGESERIHPYDLVEPMQYLFVRIVKVRGLNPPTESPFVKVRTSSHYVRSKPASYRPNEPNDSPEWNQVFALGYNKTDAASATLEISVWDSPTEQFLGGVCFDLSDVPIRDSPDSPLAPQWYRLEGGAAEQNTGRVSGDVQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVMEAQDLNLTPNLPPLTTPEIRVKVQLGFQSQRTRRGSMNHHSMSFHWHEDLLFVAGEPLEDSMVLLVEDRTTKEAALLGHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCGRVHLRLNLEGGYHVLDEAAHVCSDFRPTAKSLWKPPVGILELGILGARGLLPMKSKGPGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADASEEKPDCRIGKVRIRVSTLESNKIYTSSYPLLVLTRTGLKKMGEIELAVRFACPSFLPDMCAVYGQPLLPKMHYIRPLGVAQQEALRGAATKMVAQWLARSEPPMGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQSEAVDPDELDEEFDTMPSSKPPDMVRIRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCFVIAIILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02014 1029 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Vivi1g02014 1029 CDD C2D_MCTP_PRT_plant 618 745 IPR047255 -
Vivi1g02014 1029 Gene3D C2 domain 614 751 IPR035892 -
Vivi1g02014 1029 Pfam C2 domain 462 572 IPR000008 -
Vivi1g02014 1029 Pfam C2 domain 617 728 IPR000008 -
Vivi1g02014 1029 Pfam C2 domain 302 406 IPR000008 -
Vivi1g02014 1029 Pfam C2 domain 18 110 IPR000008 -
Vivi1g02014 1029 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 617 769 IPR035892 -
Vivi1g02014 1029 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 162 IPR035892 -
Vivi1g02014 1029 Gene3D C2 domain 14 183 IPR035892 -
Vivi1g02014 1029 MobiDBLite consensus disorder prediction 269 290 - -
Vivi1g02014 1029 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 19 1029 IPR047259 -
Vivi1g02014 1029 SMART C2_3c 618 725 IPR000008 -
Vivi1g02014 1029 SMART C2_3c 463 565 IPR000008 -
Vivi1g02014 1029 SMART C2_3c 18 123 IPR000008 -
Vivi1g02014 1029 SMART C2_3c 302 399 IPR000008 -
Vivi1g02014 1029 FunFam C2 domain-containing protein 600 752 - -
Vivi1g02014 1029 CDD C2A_MCTP_PRT_plant 18 148 - -
Vivi1g02014 1029 MobiDBLite consensus disorder prediction 155 183 - -
Vivi1g02014 1029 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 462 608 IPR035892 -
Vivi1g02014 1029 ProSiteProfiles C2 domain profile. 284 405 IPR000008 -
Vivi1g02014 1029 CDD C2C_MCTP_PRT_plant 463 606 IPR047258 -
Vivi1g02014 1029 ProSiteProfiles C2 domain profile. 600 726 IPR000008 -
Vivi1g02014 1029 FunFam C2 domain-containing protein 285 429 - -
Vivi1g02014 1029 Pfam Plant phosphoribosyltransferase C-terminal 874 1029 IPR013583 -
Vivi1g02014 1029 Gene3D C2 domain 296 428 IPR035892 -
Vivi1g02014 1029 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 302 447 IPR035892 -
Vivi1g02014 1029 Gene3D C2 domain 448 588 IPR035892 -
Vivi1g02014 1029 CDD C2B_MCTP_PRT_plant 302 431 IPR047257 -
Vivi1g02014 1029 ProSiteProfiles C2 domain profile. 442 570 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02014 Vivi-Chr1 42455209 42458572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02014 5 1029 Lipid Metabolism Gene Families AT1G74720 70.902 0.0 1551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02014 - - gmx:100783882 1771.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02014 1 42455209 42458572 Vivi1g02014 1 42455209 42458572 ECH