Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01989 ATGAAAGAGTTTGAGAAACATTTTTCAATAATGTCTAAAGCATCCTTGTTGTGTTGTGCCCTATTGGGGCTTATGGTTTTTGTTCATGCAAAGGAAAATACAAAGATTGCATTTTATGAATTGAAGAGAGGGGATTTGAGGCTTAATTTGACAAATTATGGTGCTTCAATTGTATCTGTTTTTGTACCTGATAAACATGGGAAATTAGCTGATATTGTTCTTGGCTATGATTCAATTGAGTCCTATGAGACTGATACATGTTACTTTGGTGCTCTTATTGGGCGAGTAGCAAATAGGATTGGAGGAGCTCAATTCACTTTGGATGGTAAAACATACAAATTGCCAGCTAATGATCATGGGAACACACTCCATGGTGGAACGAAAGGGTTTGGTGATAATGTATGGACAGTAGATACTCATAAGGAAGATAGTCATATCACATTTGTCTACAACAGTTCTGATGGCGAACAAGGTTTTCCTGGAAAACTTGAGGTAAGTGTGACTTACATGTTAATTGAAAAACACATATTGGGTGTGAAAATGACTGCAAAGCCAATAGACAAACCGACACCAGTAAATCTCGCACAACATACATATTGGAACCTAAGAGGACACGACAGTGGCGACATTCTATCACACACCGTTCAAATCTTTGGTTCAAACATCACACCAGTAGACGATAAACTCATCCCGACAGGCAAACTCCAACCTGTGAACAACACACCGTACGATTTCCTTACACCAAAAGAAGTTGGAAGTCGAATTAACGATCTTCCTGGTTTGTACGACATTAACTACGCGTTGGACAAGAATGGTCAGAGTCACTTGAGCAAAGATGTTGTGGTGAGAGATCCTGTCTCAGGGAGGAAAATGGAGTTATGGTCAAACCAAGTTGGGTTGCAATACTATACTAGTGGTATGTTGGGTGATACTAAAGGAAAGAATGGAGCTACATATCACAAATATGGTGGTATTGCTTTGGAGACACAGGGTTATCCGGATTCAGTGAATTTGCCTAACTTTCCATCTCAGATTGTGAAGCCTGGAGAGACTTACAAGCATATCATGGTTTATAGATTTACAGCTAGCTAG 1092 0.3947 MKEFEKHFSIMSKASLLCCALLGLMVFVHAKENTKIAFYELKRGDLRLNLTNYGASIVSVFVPDKHGKLADIVLGYDSIESYETDTCYFGALIGRVANRIGGAQFTLDGKTYKLPANDHGNTLHGGTKGFGDNVWTVDTHKEDSHITFVYNSSDGEQGFPGKLEVSVTYMLIEKHILGVKMTAKPIDKPTPVNLAQHTYWNLRGHDSGDILSHTVQIFGSNITPVDDKLIPTGKLQPVNNTPYDFLTPKEVGSRINDLPGLYDINYALDKNGQSHLSKDVVVRDPVSGRKMELWSNQVGLQYYTSGMLGDTKGKNGATYHKYGGIALETQGYPDSVNLPNFPSQIVKPGETYKHIMVYRFTAS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01989 363 PIRSF GALM 23 363 IPR015443 GO:0016853|GO:0019318
Vivi1g01989 363 Gene3D - 24 362 IPR014718 GO:0030246
Vivi1g01989 363 Pfam Aldose 1-epimerase 39 359 IPR008183 GO:0005975|GO:0016853
Vivi1g01989 363 PANTHER ALDOSE-1-EPIMERASE 32 361 - -
Vivi1g01989 363 CDD galactose_mutarotase_like 39 360 IPR047215 GO:0016853
Vivi1g01989 363 SUPERFAMILY Galactose mutarotase-like 24 360 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01989 Vivi-Chr1 42058014 42059927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01989 18 362 Miscellaneous Gene Families AT3G47800 57.971 1.55e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01989 K01785 - gmx:100806956 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01989 1 42058014 42059927 Vivi1g01989 1 42058014 42059927 ECH