Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01983 ATGGGAGGATCTGGATCCGGATCTGGTGCCGGTGATTTTCTTATGGTGCTTATCAGAAACATTGATGTTCTTGCTGGGCCTGTGGTTAGTCTTGTTTATCCTCTATATGCTTCGGTTAGGGCAATTGAGAGCAAGTCCCCTGTGGATGATCAGCAATGGCTAACCTATTGGGTTCTGTACTCCATGATCACTCTTTTTGAACTTACTTTTGCTAAAATTCTTGAATGGATTCCTATATGGCCATATGCAAAGCTGATTCTAACCTGCTGGTTGGTCCTTCCTTATTTTACTGGCGCGGCTTATGTTTATGAGCATTATGTAAGAGCCTTCTTGGCAAATCCTCAGACCATTAACATCTGGTATGTTCCAAGGAAAAAGGACGTCTTCTCTAAGCCAGATGACATTATAACTGCTGCAGAGAAGTATATCAAAGAGAATGGAACAGAAGCATTTGAGAATCTGATCCATAAGGCTGATAAATCACAGTGGGGAGGTAGTCACCATACAAAATCACAATGGGGCGATAGTCACCATACAATGTACGACGAGCATTATTGA 558 0.4211 MGGSGSGSGAGDFLMVLIRNIDVLAGPVVSLVYPLYASVRAIESKSPVDDQQWLTYWVLYSMITLFELTFAKILEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVRAFLANPQTINIWYVPRKKDVFSKPDDIITAAEKYIKENGTEAFENLIHKADKSQWGGSHHTKSQWGDSHHTMYDEHY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01983 185 Pfam TB2/DP1, HVA22 family 34 109 IPR004345 -
Vivi1g01983 185 PANTHER HVA22-LIKE PROTEINS 27 144 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01983 Vivi-Chr1 41974973 41977154 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01983 K17279 - gmx:100306331 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01983 1 41974973 41977154 Vivi1g01983 1 41974973 41977154 ECH
Vivi2g01933 2 90844386 90861210 Vivi1g01983 1 41974973 41977154 PCT