Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01941 ATGGAATCGGCGGGAGAGTGGCTGGAGAAGGCGTTGGTGGAGTTGTGTTCGAAGATTGAGACGGGTTTGGGATTAGGTTTGGATGAAGAGATTATAAAAGGGCTTGTTTCTTACTGTGATCTTGCTCAACCACGAGATGCTAAAGAGTACCTTGATAATATTATTGGTCAAGAAGTAGGGAAACCTGTAATAGAAGAATACCTAAGACGGAGAGGTCACTCAGAATTTAGCACTAAATCAGATGTTCAAACTACTACATTACATGCCTATGTCAAACCACCTGCAGTTGAGACATCTGCTAGTGGGTCTAAGAAATCGATGAGAGCACCAAAAACAGTGACTGTCCGAAGTGACCATGCAGAACCCAACAAAAATGTTGGCAGTAGTAAGGACAATGGCATTCCGGCTACAAGTAGTGAATCAAAAACATCACAAAAAGGAAATCAAGTGAGTTCCAAAAAGAAGAAAGCTGGGAAAACTATTTCACTTGCTGAGGCGGCCAAGGGGTCGATTGTGTTCCAGCAAGGAAGGCCGTGCTCTTGTCAAGCGCGTCGTCACATGCTGATCAGCAATTGCTTATCATGTGGTAAAATTGTTTGTGAGCAAGAAGGAGAGGGACCTTGCAATTTTTGTGGTGCACTTGTGTTGAAAGAAGGCAGCTCATATGCTGGTCTGGAAGAAAGTTTGCCTCCCTTATCAGACGCCGAGGCTGCTGCTGAAGCTTATGCAAAGAGGCTTGTCGATTATGACCGAAATGCCGCAGCTCGTACAACAGTTATTGATGACCAAAGTGACTACTATGAGCTTGATGGAAATACTTGGTTGTCAAAGGAGGAGAAAGATCTATTGAAGAAGAAACAAGAGGAGATGGAAGAAGCTGAACGAGCAAAACGGAATAAAGTTGTCGTAACTTTTGACCTAGTCGGCCGAAAGGTTCTTCTGAATCAAGATGAAGTTTCAGAATCGAAGTCCGACAATAGAATGTTACGTGCACCGGATGAAAGAGAAGTGAACCGCATTAAACCAAACCCAACTCTTAAGATTCAGCCAGTTTTTGTGGACCTGGGCTTCAGTAAGAAATCTGCTAACGATAGGCAATCAAACAAAGGTAGGCAATCAAACAAAGGTTTAAACAAGGGGCTGTGTTTGGAGATTACTGGGAGGGTGCAGCATGATAGCAATGACATGAAGTACCTTCAGCAAAGCCAATTCGCAACAGATTCAAATGAAAAAAATTGGCGAGTACCGTCAGGAAATGGAGGGATGCACGCTGAAGATGATGGTGAATGTTTACTGGAACTATGA 1305 0.4345 MESAGEWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCDLAQPRDAKEYLDNIIGQEVGKPVIEEYLRRRGHSEFSTKSDVQTTTLHAYVKPPAVETSASGSKKSMRAPKTVTVRSDHAEPNKNVGSSKDNGIPATSSESKTSQKGNQVSSKKKKAGKTISLAEAAKGSIVFQQGRPCSCQARRHMLISNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSYAGLEESLPPLSDAEAAAEAYAKRLVDYDRNAAARTTVIDDQSDYYELDGNTWLSKEEKDLLKKKQEEMEEAERAKRNKVVVTFDLVGRKVLLNQDEVSESKSDNRMLRAPDEREVNRIKPNPTLKIQPVFVDLGFSKKSANDRQSNKGRQSNKGLNKGLCLEITGRVQHDSNDMKYLQQSQFATDSNEKNWRVPSGNGGMHAEDDGECLLEL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01941 434 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 6 403 IPR039128 -
Vivi1g01941 434 MobiDBLite consensus disorder prediction 407 428 - -
Vivi1g01941 434 Coils Coil 232 252 - -
Vivi1g01941 434 Coils Coil 276 303 - -
Vivi1g01941 434 MobiDBLite consensus disorder prediction 119 156 - -
Vivi1g01941 434 Pfam Putative zinc finger motif, C2HC5-type 177 217 IPR009349 GO:0005634|GO:0006355|GO:0008270
Vivi1g01941 434 MobiDBLite consensus disorder prediction 87 157 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01941 K23398 - gmx:100810833 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01941 1 41381747 41385335 Vivi1g01941 1 41381747 41385335 ECH