Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01902 ATGGGGAGAGAGAATGGTTCATCAGTTCACAAGAGAACCAGTGGCGCAGCTCTACCAACAACCTACTCCAACGACAAAAACCGCCGTAACCGTTATAAAACATTCAACAACGTTAAAATCACTATCCTCTGCGGTTTTGTCACCATCCTCGTCCTACGTGGCACCATCGGTGTTAATTTCGGTTCAACCGACTCCGACGCCGTCAATCAAAGCGTTATCGAAGAAACAAACCGCATCCTCGCCGAGATCCGATCCGACGCCGACCCTTCTGATCCCGACAACAAAGAAGAAACCTTTTTCAATCCAAACGCCACTTTCACACTTGGCCCCAAAATCTCCGACTGGGATTCTCAGCGGAAGAGTTGGCTTAATCAAAACCCTGAATACCCTAGTTTCGTTAGAGGTAAAGCTCGAATCTTGCTTCTTACTGGGTCTCCTCCTAAGCCTTGTGATAATCCTATTGGTGATCATTATTTGTTGAAGTCTATTAAGAATAAGATTGATTATTGTAGATTACATGGGATTGAGATTGTTTATAATATGGCTCATCTTGATATGGAGCTTGCTGGTTATTGGGCTAAATTGCCTATGATTAGGAGGTTGATGTTGTCGCATCCTGAGGTTGAGTGGATTTGGTGGATGGACAGTGATGCTTTTTTCACTGATATGGTTTTTCAGCTTCCTTTGTTGAAGTATAATGACTATAATATGGTTATTCATGGTTACCCTGATTTGTTGTTCGAGCAAAAGTCGTGGATTGCTATCAATACTGGGAGTTTTCTGTTTAGGAACTGTCAGTGGTCCTTGGATTTGCTTGATGAGTGGGCTCCTATGGGTCCGAAAGGTCCGGTTCGTGAAGAGGCTGGTAAGGTTTTGACTGCTAATCTTAAGGGACGGCCGGCTTTTGAGGCGGATGATCAGTCTGCGTTGATATATTTGTTGCTGTCTAAGAAGAAAAAGTGGATGGATAAGGTGTTTCTCGAGAATTCTTACTATTTGCATGGTTACTGGGCTGGGTTGGTTGATAGGTACGAGGAGATGATTGAGAAGTATCATCCGGGGTTAGGAGATGAGAGATGGCCGTTTGTGACGCATTTCGTGGGTTGTAAGCCGTGTGGAAGCTATGGAGATTATCCGGTTGAGAGGTGTCTTAGTAGTATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTAAAACTGTATGGGTTCAGGCATCGTGGTCTGTTGAGTCCTAAGATTAAGAGAATCAGAAATGAGACGGTTACTCCTTTGGAGTTTGTCGACCAGTTTGATATTCGAAGGCATCCTATAGAGAATACTGAATCAAAAAGCTAG 1338 0.4372 MGRENGSSVHKRTSGAALPTTYSNDKNRRNRYKTFNNVKITILCGFVTILVLRGTIGVNFGSTDSDAVNQSVIEETNRILAEIRSDADPSDPDNKEETFFNPNATFTLGPKISDWDSQRKSWLNQNPEYPSFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFQLPLLKYNDYNMVIHGYPDLLFEQKSWIAINTGSFLFRNCQWSLDLLDEWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKKKWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHPIENTESKS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01902 445 FunFam xyloglucan 6-xylosyltransferase 2 135 286 - -
Vivi1g01902 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 136 282 IPR029044 -
Vivi1g01902 445 MobiDBLite consensus disorder prediction 1 28 - -
Vivi1g01902 445 Pfam galactosyl transferase GMA12/MNN10 family 136 374 IPR008630 GO:0016020|GO:0016757
Vivi1g01902 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 24 430 IPR008630 GO:0016020|GO:0016757
Vivi1g01902 445 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01902 Vivi-Chr1 40421765 40423621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01902 4 440 Glycosyltransferase AT1G74380 79.823 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01902 K08238 - gmx:100793238 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01902 1 40421765 40423621 Vivi1g01902 1 40421765 40423621 ECH