Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01893 ATGACTACCTCGCCGCACCGTTCTGGCGGCGAAAGCGACGGCAACGGCGACAAAAGACCAAGACAGTTTGACACAAAGACAAAGAGCATCTGCTGGACAAAGGCTGATACTGTACCCGGCCGCCATCCAGAAAGGTGGCGTAAAGACGCCGCAGGTAACATTGTCTGCAAGCGCTTCTTCAACTGCCTTGGTTGCCTCTGCTACGAGTACGATCACATCGTCCCTTTTTCCAAAGGCGGTGAATCGACAGCCGATAATTGCCAAATACTTCAATCAAGAGTTAATAGATTGAAATCGGACAAATATCAGATTGATTCGGAGAAGTTGAAAGGTTACTCTTGTGATATTAATTTTACTGACAAGGAGCTCGATATAATTGAGATGGCTGTTTATGGTGATGTAATCCGGCCAGGGAACCAGTGTAGATGCAGAACTGTTGATGAAATGCTTGGAAAATTTAAGGCCAAAGCAAAAGACAACACAGATGCATGCAAGTTGCCTTAG 504 0.4583 MTTSPHRSGGESDGNGDKRPRQFDTKTKSICWTKADTVPGRHPERWRKDAAGNIVCKRFFNCLGCLCYEYDHIVPFSKGGESTADNCQILQSRVNRLKSDKYQIDSEKLKGYSCDINFTDKELDIIEMAVYGDVIRPGNQCRCRTVDEMLGKFKAKAKDNTDACKLP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01893 167 CDD HNHc 57 99 IPR003615 -
Vivi1g01893 167 PANTHER HNH ENDONUCLEASE 15 145 - -
Vivi1g01893 167 Pfam HNH endonuclease 67 100 IPR002711 GO:0003676|GO:0004519|GO:0008270
Vivi1g01893 167 Gene3D - 31 117 - -
Vivi1g01893 167 MobiDBLite consensus disorder prediction 1 23 - -
Vivi1g01893 167 SMART HNH_5 50 96 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01893 Vivi-Chr1 40088844 40090889 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01893 - - psat:127073757 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01893 1 40088844 40090889 Vivi1g01893 1 40088844 40090889 ECH