Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01851 ATGGCTGCTGCTTTTGCTCTTGCCCTACTTCTCTTCTCCCTCACCGCCATTCCTTCAAGTGCTAATTGGTGTGTTTGCAAAGATGGAAGTGACGCAGTGTTGCAGAAAACCTTAGACTATGCTTGTGGAGCTGGAGCTGACTGTAACCCTCTCCATCAAAACGCACCTTGTTTCCAACCAAACACAGTCAGAGCTCACTGCAGCTACGCTGTGAATAGCTACTTCCAGAAGAAAGGTCAAGCACCAGGGACTTGTGACTTTGCAGGAACAGCTACTCCTGTTGCATCTGACCCAAGTGTTAGTGGCTGTGTCTTCCCTTCAAGTGCCAGTGGTGCAGGCACTAGCACAACAACCCCATCAACAGGCACCACTACACCCTCCATGGGAACCGGCACCCCTTCGACAAGTACCGGCACCGGCACCAGCAGTGGTATGGGCACAGGCACGGGCACGGGCACTGGTACCAGCACCGGCACCGGCACGGGTACTACTCCATACAACACATCACCTGGTGTGTTAGGAGGTATTGGAACTGGTATGGGGCCTTCTGGATCTGGAGGAATGAATGATGATAGTCATGGTGGGAATAGACTTTTGGACACTAGTTTCTTATCAATTCCACTTTTCTCTATTTTCATTATGTTTTGGTAG 651 0.5069 MAAAFALALLLFSLTAIPSSANWCVCKDGSDAVLQKTLDYACGAGADCNPLHQNAPCFQPNTVRAHCSYAVNSYFQKKGQAPGTCDFAGTATPVASDPSVSGCVFPSSASGAGTSTTTPSTGTTTPSMGTGTPSTSTGTGTSSGMGTGTGTGTGTSTGTGTGTTPYNTSPGVLGGIGTGMGPSGSGGMNDDSHGGNRLLDTSFLSIPLFSIFIMFW 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01851 216 SMART X8_cls 22 105 IPR012946 -
Vivi1g01851 216 PANTHER BETA-1,3 GLUCANASE 8 125 IPR044788 -
Vivi1g01851 216 MobiDBLite consensus disorder prediction 109 172 - -
Vivi1g01851 216 FunFam Glucan endo-1,3-beta-glucosidase 4 18 109 - -
Vivi1g01851 216 MobiDBLite consensus disorder prediction 109 171 - -
Vivi1g01851 216 Gene3D - 17 113 - -
Vivi1g01851 216 Pfam X8 domain 23 92 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01851 Vivi-Chr1 39553902 39555948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01851 19 118 Miscellaneous Gene Families AT2G16230 43.564 2.70e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01851 - - gmx:100500078 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01851 1 39553902 39555948 Vivi1g01851 1 39553902 39555948 ECH