Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01845 ATGATACTCGACCAGAAAGAACTCTACCTCTCCGAAAACTCACAATCACTTCCAGAGAAGACGAAACTGAACGAAGCAATGAAGTCTGAGAGCGATGAGAACACAAGCAAAACCACCTCTCGTCGCAACGTTGGTTTACTCTACGACGAAAGAATGTGCAATCACTTCGATCCTTTGGACGATTACCATCCCGAAACTCCGAATCGCATTAGATCTATCTGGAACAAGCTTCAAACCACCGGCATTACCGATCGTTGTGTGATTTTGGATGCTAAAGAAGCTGAAGATAAACAGTTACTATCAGTGCATTCTGCAAAGCATGTGAATCAGATCAAGAAGATCAGCTCTAAGAGTTTTAACTCGAGGAATAACATTGCGGCGAGACTTAATTCCATATATTTCAATGAAGGTTCAACAGAAGCTGCTTATCTTGCTGCTGGCTCCACTATTGAGGTTGCTAAAAGAGTAGCAAGCAAGGAATTGCATTCAGCTGCTGCTATTGTCAGGCCTCCAGGTCATCATGCAGAGCATAATGAAGCCATGGGATTTTGTCTGTTCAACAATGTGGCAATTGCTGCATCTTATCTCTTAGATGAAACTCCGGAATTTGGTGTAAAGAAAATTTTAATTGTTGACTGGGACGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCGAGTGTTATTCTTCTCCGTTCATAGGCATGAATTTGGGAGTTTTTATCCAGCAAATGATGATGGATTTTATGACAAGATTGGAGAAGGAGCAGGTGCTGGATACAATATAAATGTGCCATGGGAGAATGGTGGATGTGGTGATGCAGACTATTTAGCAGCGTGGGACCACATCTTGCTCCCCGTTGCCAAAGAATTTAATCCAGACATAATAATAGTTTCTGCTGGATTTGATGCAGCCGTTGGAGACCCTTTGGGTGGATGTCGTATCACACCATTTGGTTATTCTGTCCTGTTGAAAAAGCTGATGGATTTTGCTGAAGGTAGGATTGTACTGGTTTTAGAAGGAGGGTATAATCTTGACTCCATTGCAAAATCAACACATGCTTGTTTGGAAGTTTTGCTTGAAGACAAGCCTCTAACGGGATCATCTGAGACCCATCCATTTGAGTCTACATGGCGTGTGATCCAAGCGGTTCGCCAGAAGTTAAGTCCCTTTTGGCCTACACTTGCGTGTGAAATACCACAAAAAATAATTGGTCAAGTGGCACCTCCTCCGCATACTCTTTTGTCAAGCTCTGACTCTGAGACTGAGGATGACAAAGCTCCACTCAAATTAAAAAATATTGCTGACCTTCTTTCGAAGCTTAAAGTTGATGCAGATGAAGAGTGTGATGCTTCTTGTTCATGGCGATCTGAATTGTCAAATGTTTACATATGGTATGCTTCATATGGCTCAAATATGTGGAGACCAAGATTTGATTGCTACATAGCCGGTGGACAGGTGGAAGGTATGCAGAAGACCTGCCCTGGTTCTCTAAACAAAACTCTTCCGAATGAGATCCTTTGGAAGACTTTCCCCTGTCGTTTATTTTTTGGACGTGATTCCTCATATTCATGGGGTCCTGGAGGTGTTGCTTTTCTTAATCCTCAAACAAACTCTCAACTCAAGACCTACATGTGCCTGTATAAAATTTCGTTAGAGCAGTTCAATGATGTTTTATTTCAGGAAAATGTCTTAAGCCTTGATGCGGATTCTTCTTTATTTGATATGACTACTCTGAATGACATATCTAATAAGGAATTCAGTTCTCAGGAGGTTGTCAAGGATAGTTGGTATGGCAATGTTGTCTACTTAGGAAAGGACCAGGACATTCCTATAATTACTATGACGTGTTCGGGTCTTGCTATTGAGAGCTTCAAATCAGGGAAGCTACCATTGCGCCCACCTAATAAATCGTATGCTAATACCTTAATAAAAGGGTTGGTAGAGGGAGAACAGCTCTCAGAGGAGGAAGCCATTGCTTACATAGACGCTGCTGCTGTTGCTGAGTTGTTGTGA 2028 0.4186 MILDQKELYLSENSQSLPEKTKLNEAMKSESDENTSKTTSRRNVGLLYDERMCNHFDPLDDYHPETPNRIRSIWNKLQTTGITDRCVILDAKEAEDKQLLSVHSAKHVNQIKKISSKSFNSRNNIAARLNSIYFNEGSTEAAYLAAGSTIEVAKRVASKELHSAAAIVRPPGHHAEHNEAMGFCLFNNVAIAASYLLDETPEFGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYDKIGEGAGAGYNINVPWENGGCGDADYLAAWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRITPFGYSVLLKKLMDFAEGRIVLVLEGGYNLDSIAKSTHACLEVLLEDKPLTGSSETHPFESTWRVIQAVRQKLSPFWPTLACEIPQKIIGQVAPPPHTLLSSSDSETEDDKAPLKLKNIADLLSKLKVDADEECDASCSWRSELSNVYIWYASYGSNMWRPRFDCYIAGGQVEGMQKTCPGSLNKTLPNEILWKTFPCRLFFGRDSSYSWGPGGVAFLNPQTNSQLKTYMCLYKISLEQFNDVLFQENVLSLDADSSLFDMTTLNDISNKEFSSQEVVKDSWYGNVVYLGKDQDIPIITMTCSGLAIESFKSGKLPLRPPNKSYANTLIKGLVEGEQLSEEEAIAYIDAAAVAELL 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01845 675 SUPERFAMILY Arginase/deacetylase 41 397 IPR023696 -
Vivi1g01845 675 FunFam Histone deacetylase 15 37 413 - -
Vivi1g01845 675 MobiDBLite consensus disorder prediction 13 41 - -
Vivi1g01845 675 PRINTS Histone deacetylase superfamily signature 297 307 IPR000286 -
Vivi1g01845 675 PRINTS Histone deacetylase superfamily signature 170 193 IPR000286 -
Vivi1g01845 675 Pfam Histone deacetylase domain 63 362 IPR023801 -
Vivi1g01845 675 MobiDBLite consensus disorder prediction 23 37 - -
Vivi1g01845 675 PANTHER HISTONE DEACETYLASE 9-RELATED 15 416 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Vivi1g01845 675 Gene3D - 454 673 - -
Vivi1g01845 675 Gene3D Histone deacetylase domain 36 411 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01845 Vivi-Chr1 39422593 39430809 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01845 K11406 - gmx:100788831 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01845 1 39422593 39430809 Vivi1g01845 1 39422593 39430809 ECH