Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01817 ATGGGTTGGGCCATAGCTCTACATGGCGGCGCCGGCGACATTCCATATTCACTTCCACCGGAACGCCGCCTTCCACGGGAAGAAGCCCTCCGTCACTGCCTACAAATCGGTGTCAAAGCTCTCAAATCCAACATGACTCCTTTAGACGTCGTTGAACTCGTTGTTCGTGAGTTAGAGGATATTCCACACTTCAATGCTGGAAGAGGTTCTGTTCTCACCAGCAAAGGGACCGTTGAAATGGAAGCTTCTATTATGGATGGTAACACTATGAAATGTGGTGCTGTTTCTGGTCTTACCACTGTTGTTAATGCCGTTTCTTTGGCTCGGTTGGTTATGGATCGTACTCCTCATATTTACTTGGCGTTTGATGGTGCTGAGGAATTTGCTAGACAACAAGGGGTTGAGACTTTAGATTCAAGCCATTTCATCACTCCGGAAAATATTGAAAGACTAAATCAGGCAAAAGATGCAAATAGGGTTCAGATTGATTATACTCAACCAATCCAAAACGATGCTGCCAAGAATGAAACAGAAACAGAAACACCATTTGCTAATGGTGATAGTCAAATTGGAACTGTTGGATGTGTAGCTGTTGACAGTAATGGGAATCTAGCTTCTGCAACATCAACTGGTGGATTGGTGAACAAGATGGCTGGTCGAATCGGTGACACGCCCGTCATAGGTGCTGGAACATATGCCAATGAATTTTGTGCAGTTTCTGCGACAGGAAAAGGCGAAGCAATTATCCGCGCGACCGTAGCAAGAGACGTGGCTGCAATGATGGAGTTCAAAGGCCTTTCTTTAAAGGAAGCTGCGGATTGTGTCGTACATGAGCGCACACCAAAGGGCACTGTTGGTTTGGTTGCTGTGTCTGCTGCAGGTGAAGTTGCAATGCCTTATAATACAACAGGAATGTTTAGAGCATGTGCTACTGAAGATGGATATTCTGAAGTTGCAATTTGGCCAAATACCAAAGTGGAGTGA 984 0.4543 MGWAIALHGGAGDIPYSLPPERRLPREEALRHCLQIGVKALKSNMTPLDVVELVVRELEDIPHFNAGRGSVLTSKGTVEMEASIMDGNTMKCGAVSGLTTVVNAVSLARLVMDRTPHIYLAFDGAEEFARQQGVETLDSSHFITPENIERLNQAKDANRVQIDYTQPIQNDAAKNETETETPFANGDSQIGTVGCVAVDSNGNLASATSTGGLVNKMAGRIGDTPVIGAGTYANEFCAVSATGKGEAIIRATVARDVAAMMEFKGLSLKEAADCVVHERTPKGTVGLVAVSAAGEVAMPYNTTGMFRACATEDGYSEVAIWPNTKVE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01817 327 Pfam Asparaginase 3 321 IPR000246 GO:0016787
Vivi1g01817 327 FunFam Isoaspartyl peptidase/L-asparaginase 192 323 - -
Vivi1g01817 327 PANTHER L-ASPARAGINASE 3 320 IPR000246 GO:0016787
Vivi1g01817 327 CDD Asparaginase_2 4 314 - -
Vivi1g01817 327 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 321 IPR029055 -
Vivi1g01817 327 Gene3D (Glycosyl)asparaginase 192 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01817 Vivi-Chr1 38859075 38860673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01817 5 299 Miscellaneous Gene Families AT4G00590 25.688 3.37e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01817 K13051 - gmx:100799400 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01817 1 38859075 38860673 Vivi1g01817 1 38859075 38860673 ECH