Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01808 ATGGAGTTGTGGAACAAAGCTCGAAGCTTTGCAGAAGAAGCATCGAAACGATCACAAGACCTTTCCTTGAATGCTCACAAGTTCACCGAAATCATAGCAGAAACCACCAAGGGGATCGCGGCACAAGCCCAAGCTTCCATGCACTTGGCCGAATCTTCATTCAATAAGGATGTCGATATTGATCTTAATCTTGAGAGTTTCGGTATCACCGATGAATTGAGGGAGTTCATCAGAGGAATCACCGTCACTACTTTCCGAGATTTCCCTCTTCAAGATGATACAGAACTCTCTGATGTTCCTGCAGTTTCAAATATTAGGCAGGATCTAACCGAGTGGCAGGAAAAACATGCCAATCTTGTTCTTTCTACTGTCAAGGAGATTTCGACATTGAGGTATGAGCTGTGTCCACGTGTTATGAAAGAGAGAAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATATTGCACCCTATGAGAATCGGTATATGGAAGATGCTAAACTAAAATCATCCGAGCGAGTTAAAGATCAAATAGAAATGAAACCATTAGAAGTTGAATTAACCTCTAATCAAGAAGTCAAGGAAATAAAAAAAGAGACCAAAACATCAAATTCATCACGCCAGCAAGACTTGGATGCATTTCTTCTAGGAGATACAGAAGATAGTGATGATGACCCAGATTACGATGATGGTGGATTTGATGATGACTTAGACAAACTGGAAGAAAGTTCGACTTGCTTGAATATACAGGAAGATGAGAAAGAAAAGGCATAG 777 0.3964 MELWNKARSFAEEASKRSQDLSLNAHKFTEIIAETTKGIAAQAQASMHLAESSFNKDVDIDLNLESFGITDELREFIRGITVTTFRDFPLQDDTELSDVPAVSNIRQDLTEWQEKHANLVLSTVKEISTLRYELCPRVMKERKFWRIYFILVNNHIAPYENRYMEDAKLKSSERVKDQIEMKPLEVELTSNQEVKEIKKETKTSNSSRQQDLDAFLLGDTEDSDDDPDYDDGGFDDDLDKLEESSTCLNIQEDEKEKA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01808 258 SMART wurzfinal6 104 156 IPR005607 -
Vivi1g01808 258 Pfam BSD domain 111 156 IPR005607 -
Vivi1g01808 258 PANTHER BSD DOMAIN-CONTAINING PROTEIN 12 236 - -
Vivi1g01808 258 ProSiteProfiles BSD domain profile. 111 156 IPR005607 -
Vivi1g01808 258 MobiDBLite consensus disorder prediction 198 258 - -
Vivi1g01808 258 SUPERFAMILY BSD domain-like 68 161 IPR035925 -
Vivi1g01808 258 MobiDBLite consensus disorder prediction 217 238 - -
Vivi1g01808 258 MobiDBLite consensus disorder prediction 239 258 - -
Vivi1g01808 258 Gene3D BSD domain 82 165 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01808 Vivi-Chr1 38430425 38438338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01808 2 227 EF-hand Containing Proteins AT1G69030 45.175 1.31e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01808 - - psat:127073696 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01808 1 38430425 38438338 Vivi1g01808 1 38430425 38438338 ECH